RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZFYP08048 801 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 POTEIP0CG38 1075 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 POTEJP0CG39 1038 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 PLCG2P16885 1265 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 TICAM2Q86XR7 235 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 CERS3Q8IU89 383 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 SULF1Q8IWU6 871 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 PCDHAC2Q9Y5I4 1007 aa14.4□□□□□ -0.1
SPTLC1-202ENST00000337841 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 RNF113AO15541 343 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 ATXN8OSP0DMR3 200 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 PDE6AP16499 860 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 BTDP43251 543 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 TNNI2P48788 182 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 PPP4CP60510 307 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 FSTL1Q12841 308 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 KRT26Q7Z3Y9 468 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 APOBEC3FQ8IUX4 373 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 GGA3Q9NZ52 723 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 PITPNM2Q9BZ72 1349 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 ZNF532Q9HCE3 1301 aa14.39□□□□□ -0.11
SPTLC1-202ENST00000337841 SCN4AP35499 1836 aa14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 ADD2P35612 726 aa14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 TTC22Q5TAA0 569 aa14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 FKBP1CQ5VVH2 108 aa14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-202ENST00000337841 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
SPTLC1-202ENST00000337841 RGS3P49796 1198 aa14.37□□□□□ -0.11
SPTLC1-202ENST00000337841 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTLC1-202ENST00000337841 TCRBV5S4A2TA0A5A2 114 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 GLIS2Q9BZE0 524 aaPredicted RBP14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 DEFB129Q9H1M3 183 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 PSME4Q14997 1843 aa14.36□□□□□ -0.11
SPTLC1-202ENST00000337841 HIP1O00291 1037 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 RHBDL3P58872 404 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 RASA3Q14644 834 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 FAM83AQ86UY5 434 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 APPBP2Q92624 585 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 PPP2R3BQ9Y5P8 575 aa14.35□□□□□ -0.11
SPTLC1-202ENST00000337841 ENTPD3O75355 529 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 SDSP20132 328 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 CACNB3P54284 484 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 SUPT20HL1Q3ZLR7 823 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 FAM151AQ8WW52 585 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 AIDAQ96BJ3 306 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 GTF3C3Q9Y5Q9 886 aa14.34□□□□□ -0.11
SPTLC1-202ENST00000337841 AKAP11Q9UKA4 1901 aa14.33□□□□□ -0.11
SPTLC1-202ENST00000337841 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 NF2P35240 595 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 USP5P45974 858 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 TCP10Q12799 353 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 HOOK2Q96ED9 719 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
SPTLC1-202ENST00000337841 WDHD1O75717 1129 aaPredicted RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 MBD4O95243 580 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 GSPT1P15170 499 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 PICALMQ13492 652 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 RIOK1Q9BRS2 568 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-202ENST00000337841 TRAF5O00463 557 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 CHGBP05060 677 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 GNAT2P19087 354 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 NFIAQ12857 509 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 MCMDC2Q4G0Z9 681 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 PRAMEF18Q5VWM3 479 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 CDCA5Q96FF9 252 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
SPTLC1-202ENST00000337841 ZNF646O15015 1829 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms