RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
NPHP3-201ENST00000337331 TMOD2Q9NZR1 351 aa18.15■□□□□ 0.5
NPHP3-201ENST00000337331 MAGI2Q86UL8 1455 aa18.15■□□□□ 0.5
NPHP3-201ENST00000337331 SATB1Q01826 763 aa18.15■□□□□ 0.5
NPHP3-201ENST00000337331 TTC19Q6DKK2 380 aaPredicted RBP18.15■□□□□ 0.5
NPHP3-201ENST00000337331 C6orf229H3BNL8 230 aa18.14■□□□□ 0.5
NPHP3-201ENST00000337331 KIF4AO95239 1232 aa18.14■□□□□ 0.5
NPHP3-201ENST00000337331 RPSAP08865 295 aaKnown RBP18.14■□□□□ 0.5
NPHP3-201ENST00000337331 RRAGBQ5VZM2 374 aa18.14■□□□□ 0.5
NPHP3-201ENST00000337331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.14■□□□□ 0.5
NPHP3-201ENST00000337331 AKR1B10O60218 316 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC40Q4G0X9 1142 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 TCERG1LQ5VWI1 586 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 DESI2Q9BSY9 194 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 SAMM50Q9Y512 469 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 RXRAP19793 462 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 AMPD3Q01432 767 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 PTPN21Q16825 1174 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 CNNM2Q9H8M5 875 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 PPFIA4O75335 1185 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 LDHCP07864 332 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 KCNA6P17658 529 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 TRIM21P19474 475 aaKnown RBP18.14■□□□□ 0.49
NPHP3-201ENST00000337331 JADE2Q9NQC1 790 aa18.14■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC151A5D8V7 595 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 GOLGA8FQ08AF8 430 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 GOLGA8DPQ0D2H9 430 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 FAM71BQ8TC56 605 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 PYM1Q9BRP8 204 aaKnown RBP18.13■□□□□ 0.49
NPHP3-201ENST00000337331 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
NPHP3-201ENST00000337331 ARHGAP6O43182 974 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 PLA2G4DQ86XP0 818 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 CABS1Q96KC9 395 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 FAM227BQ96M60 508 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
NPHP3-201ENST00000337331 IFIT1BQ5T764 474 aaKnown RBP18.13■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 TMEM87AQ8NBN3 555 aa18.13■□□□□ 0.49
NPHP3-201ENST00000337331 TRIM75PA6NK02 468 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 BAG3O95817 575 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC178Q5BJE1 867 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 PRR29P0C7W0 189 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CDC25BP30305 580 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 IP6K1Q92551 441 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 DHX58Q96C10 678 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 DBNDD2Q9BQY9 259 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 HSF2BPO75031 334 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 MICAL1Q8TDZ2 1067 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 BMP15O95972 392 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 GNGT1P63211 74 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 E2F5Q15329 346 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CRNKL1Q9BZJ0 848 aaKnown RBP18.12■□□□□ 0.49
NPHP3-201ENST00000337331 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
NPHP3-201ENST00000337331 ANKRD62A6NC57 917 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 PACS2Q86VP3 889 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 PPP2R2CQ9Y2T4 447 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
NPHP3-201ENST00000337331 MYO1BO43795 1136 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 TUBBP07437 444 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 ME3Q16798 604 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 SPECC1Q5M775 1068 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 SPTY2D1Q68D10 685 aaPredicted RBP18.11■□□□□ 0.49
NPHP3-201ENST00000337331 OPA1O60313 960 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 STX17P56962 302 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 SPAG1Q07617 926 aa18.11■□□□□ 0.49
NPHP3-201ENST00000337331 SPATS2LQ9NUQ6 558 aaKnown RBP18.11■□□□□ 0.49
NPHP3-201ENST00000337331 RNF40O75150 1001 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 MTX1Q13505 466 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 FBXW10Q5XX13 1052 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 MAATS1Q7Z4T9 603 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
NPHP3-201ENST00000337331 RGS12O14924 1447 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 TMCO5BA8MYB1 307 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 SLC27A2O14975 620 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 RPS6KB1P23443 525 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 PDE6BP35913 854 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 TRMT1LQ7Z2T5 733 aaKnown RBP18.1■□□□□ 0.49
NPHP3-201ENST00000337331 ALS2CR12Q96Q35 445 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 GUCA1BQ9UMX6 200 aa18.1■□□□□ 0.49
NPHP3-201ENST00000337331 NOP2P46087 812 aaKnown RBP18.09■□□□□ 0.49
NPHP3-201ENST00000337331 HINFPQ9BQA5 517 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 ADKP55263 362 aaKnown RBP18.09■□□□□ 0.49
NPHP3-201ENST00000337331 STAT6P42226 847 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 ARHGAP25P42331 645 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
NPHP3-201ENST00000337331 FAM114A1Q8IWE2 563 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 PAIP2Q9BPZ3 127 aaKnown RBP18.09■□□□□ 0.49
NPHP3-201ENST00000337331 TUBB4BP68371 445 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 IFFO1Q0D2I5 559 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 CTAGE1Q96RT6 745 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 NCOA5Q9HCD5 579 aaKnown RBP18.09■□□□□ 0.49
NPHP3-201ENST00000337331 RMND1Q9NWS8 449 aa18.09■□□□□ 0.49
NPHP3-201ENST00000337331 H2AFXP16104 143 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms