RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.33
C9orf47-201ENST00000334490 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.33
C9orf47-201ENST00000334490 DNA2P51530 1060 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 MYL10Q9BUA6 226 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 PKD2L1Q9P0L9 805 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 CLASP1Q7Z460 1538 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 SYNMO15061 1565 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 CYP27B1O15528 508 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 KIF5CO60282 957 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 CPXCR1Q8N123 301 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 SCNN1DP51172 638 aa17.08■□□□□ 0.32
C9orf47-201ENST00000334490 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 ZNF174Q15697 407 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 DPY19L2Q6NUT2 758 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 USP37Q86T82 979 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 PLIN2Q99541 437 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 AFF2P51816 1311 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 PDE6AP16499 860 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 ERLIN1O75477 346 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 UBE4AQ14139 1066 aa17.07■□□□□ 0.32
C9orf47-201ENST00000334490 GOLGA6L10A6NI86 522 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 ZSCAN30Q86W11 494 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
C9orf47-201ENST00000334490 KRT13P13646 458 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 SPAG5Q96R06 1193 aa17.06■□□□□ 0.32
C9orf47-201ENST00000334490 MACROD2A1Z1Q3 448 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 FAM13AO94988 1023 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 ADCY5O95622 1261 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 PHKA1P46020 1223 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 PHACTR2O75167 634 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 GSDMDP57764 484 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 VWA3AA6NCI4 1184 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
C9orf47-201ENST00000334490 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
C9orf47-201ENST00000334490 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 IQUBQ8NA54 791 aa17.05■□□□□ 0.32
C9orf47-201ENST00000334490 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
C9orf47-201ENST00000334490 XDHP47989 1333 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 SPAG1Q07617 926 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 PPARAQ07869 468 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
C9orf47-201ENST00000334490 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 ANO6Q4KMQ2 910 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 CENPHQ9H3R5 247 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
C9orf47-201ENST00000334490 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
C9orf47-201ENST00000334490 TNNT1P13805 278 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 UBASH3AP57075 661 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 HS2ST1Q7LGA3 356 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
C9orf47-201ENST00000334490 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 UBXN4Q92575 508 aa17.04■□□□□ 0.32
C9orf47-201ENST00000334490 SEC62Q99442 399 aaKnown RBP17.04■□□□□ 0.32
C9orf47-201ENST00000334490 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 E7EWF7 191 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
C9orf47-201ENST00000334490 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 HAUS7Q99871 368 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 AKR1B10O60218 316 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 URI1O94763 535 aaPredicted RBP17.03■□□□□ 0.32
C9orf47-201ENST00000334490 NCBP1Q09161 790 aaKnown RBP17.03■□□□□ 0.32
C9orf47-201ENST00000334490 SEPT7Q16181 437 aaKnown RBP17.03■□□□□ 0.32
C9orf47-201ENST00000334490 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 BBOX1O75936 387 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 PHKBQ93100 1093 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
C9orf47-201ENST00000334490 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
C9orf47-201ENST00000334490 ADORA1P30542 326 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 PPP2R5BQ15173 497 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 IFNL3Q8IZI9 196 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 DRC1Q96MC2 740 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.32
C9orf47-201ENST00000334490 NEMFO60524 1076 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 ZBED4O75132 1171 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 NOP2P46087 812 aaKnown RBP17.02■□□□□ 0.32
C9orf47-201ENST00000334490 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
C9orf47-201ENST00000334490 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms