RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 KIF14Q15058 1648 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 CASKIN1Q8WXD9 1431 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 DENND2CQ68D51 928 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 OLFM3Q96PB7 478 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 ABCF2Q9UG63 623 aa11.52□□□□□ -0.56
SPTBN1-201ENST00000333896 NRBF2Q96F24 287 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 TXLNGQ9NUQ3 528 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 RBSNQ9H1K0 784 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 CCT2P78371 535 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 TMED1Q13445 227 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 CCDC42Q96M95 316 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 CNOT10Q9H9A5 744 aaKnown RBP11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 PALMDQ9NP74 551 aa11.52□□□□□ -0.57
SPTBN1-201ENST00000333896 SIRT1Q96EB6 747 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 DDX41Q9UJV9 622 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 CACNA1FO60840 1977 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 AFAP1L2Q8N4X5 818 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 DAPK1P53355 1430 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 ST13P4Q8IZP2 240 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 CLTAP09496 248 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 ATP6V1E1P36543 226 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 TTC22Q5TAA0 569 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 PPP1R2P41236 205 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 RWDD2BP57060 319 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 CFAP221Q4G0U5 840 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 KDM5AP29375 1690 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 FRMD3A2A2Y4 597 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 GIPC1O14908 333 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 CAPRIN2Q6IMN6 1127 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 ATP2A3Q93084 1043 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 CSRNP2Q9H175 543 aa11.51□□□□□ -0.57
SPTBN1-201ENST00000333896 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 PSPC1Q8WXF1 523 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 TUBB6Q9BUF5 446 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 NAPBQ9H115 298 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 DNAJC25Q9H1X3 360 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 PTPRCP08575 1304 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 PPARDQ03181 441 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 ITIH3Q06033 890 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 SUN1O94901 812 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 INF2Q27J81 1249 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 LZICQ8WZA0 190 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 GUCA1BQ9UMX6 200 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 ATP6V0A2Q9Y487 856 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 I3L4J1 428 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 TROVE2P10155 538 aaKnown RBP eCLIP11.5□□□□□ -0.572e-11■□□□□ 10.1
SPTBN1-201ENST00000333896 E2F4Q16254 413 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 RAB17Q9H0T7 212 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 LZTFL1Q9NQ48 299 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 TMTC1Q8IUR5 882 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 DONSONQ9NYP3 566 aa11.5□□□□□ -0.57
SPTBN1-201ENST00000333896 GCFC2P16383 781 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 PDZD8Q8NEN9 1154 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 RAP1GDS1P52306 607 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 ABTB1Q969K4 478 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 MYH7P12883 1935 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 PHEXP78562 749 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 CRYMQ14894 314 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 SLC30A9Q6PML9 568 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 CCDC51Q96ER9 411 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 IFNKQ9P0W0 207 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 STAT6P42226 847 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 GNGT1P63211 74 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 GAS2L2Q8NHY3 880 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 GIMAP4Q9NUV9 329 aa11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 EIF3CLB5ME19 914 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-201ENST00000333896 GFAPP14136 432 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms