RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 WTIPA6NIX2 430 aaPredicted RBP20.31■□□□□ 0.84
DDX28-201ENST00000332395 ADCY5O95622 1261 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 PTMAP06454 111 aaKnown RBP20.31■□□□□ 0.84
DDX28-201ENST00000332395 TDO2P48775 406 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 AKNAD1Q5T1N1 836 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 MIGA1Q8NAN2 632 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 CNNM2Q9H8M5 875 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 LY9Q9HBG7 655 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 MINPP1Q9UNW1 487 aa20.31■□□□□ 0.84
DDX28-201ENST00000332395 OFD1O75665 1012 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 TMEM67Q5HYA8 995 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 SGMS1Q86VZ5 419 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 FAM200AQ8TCP9 573 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
DDX28-201ENST00000332395 NYXQ9GZU5 481 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 ZSWIM5Q9P217 1185 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 SRP68Q9UHB9 627 aaKnown RBP20.3■□□□□ 0.84
DDX28-201ENST00000332395 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
DDX28-201ENST00000332395 GNPATO15228 680 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 RXRAP19793 462 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 CCAR1Q8IX12 1150 aaKnown RBP20.29■□□□□ 0.84
DDX28-201ENST00000332395 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 PDCL3Q9H2J4 239 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 ABCF2Q9UG63 623 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 USP21Q9UK80 565 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 COL1A1P02452 1464 aaPredicted RBP20.29■□□□□ 0.84
DDX28-201ENST00000332395 NHSQ6T4R5 1651 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 THSD7AQ9UPZ6 1657 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 COL24A1Q17RW2 1714 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 ZBTB43O43298 467 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 CDKL5O76039 1030 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 CYP7A1P22680 504 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 NFXL1Q6ZNB6 911 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 MFSD6Q6ZSS7 791 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 KRT23Q9C075 422 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 GJB4Q9NTQ9 266 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
DDX28-201ENST00000332395 CDC27P30260 824 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 LIFRP42702 1097 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 CAVIN4Q5BKX8 364 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 BRAPQ7Z569 592 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 ADGRA1Q86SQ6 560 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 ZPR1O75312 459 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 ME1P48163 572 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 CPLX2Q6PUV4 134 aaKnown RBP20.28■□□□□ 0.84
DDX28-201ENST00000332395 RGS22Q8NE09 1264 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 STAG1Q8WVM7 1258 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 GOLPH3LQ9H4A5 285 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 RAI14Q9P0K7 980 aa20.28■□□□□ 0.84
DDX28-201ENST00000332395 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
DDX28-201ENST00000332395 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
DDX28-201ENST00000332395 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
DDX28-201ENST00000332395 TERF1P54274 439 aa20.27■□□□□ 0.84
DDX28-201ENST00000332395 NBPF5PQ86XG9 351 aaPredicted RBP20.27■□□□□ 0.84
DDX28-201ENST00000332395 VPS37DQ86XT2 251 aa20.27■□□□□ 0.84
DDX28-201ENST00000332395 ZNF500O60304 480 aaPredicted RBP20.27■□□□□ 0.83
DDX28-201ENST00000332395 ANO6Q4KMQ2 910 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 FAM182BQ5T319 152 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 SASS6Q6UVJ0 657 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 CCDC73Q6ZRK6 1079 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 NLRP3Q96P20 1036 aa20.27■□□□□ 0.83
DDX28-201ENST00000332395 GOLGA8AA7E2F4 631 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 PLCB2Q00722 1185 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
DDX28-201ENST00000332395 MYSM1Q5VVJ2 828 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.26■□□□□ 0.83
DDX28-201ENST00000332395 FAM84BQ96KN1 310 aaPredicted RBP20.26■□□□□ 0.83
DDX28-201ENST00000332395 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 MYL10Q9BUA6 226 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
DDX28-201ENST00000332395 SLC12A7Q9Y666 1083 aa20.26■□□□□ 0.83
DDX28-201ENST00000332395 CACNA1SQ13698 1873 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 KIF28PB7ZC32 967 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
DDX28-201ENST00000332395 SNW1Q13573 536 aaKnown RBP20.25■□□□□ 0.83
DDX28-201ENST00000332395 NTRK3Q16288 839 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
DDX28-201ENST00000332395 LINC00301Q8NCQ3 95 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 PHKBQ93100 1093 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 AIFM3Q96NN9 605 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 POLR3EQ9NVU0 708 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 PCDHA7Q9UN72 937 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 AP5Z1O43299 807 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 FAM160A1Q05DH4 1040 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
DDX28-201ENST00000332395 CLIC4Q9Y696 253 aa20.25■□□□□ 0.83
DDX28-201ENST00000332395 CTAGE5O15320 804 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 ENGASEQ8NFI3 743 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 SDR42E1Q8WUS8 393 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 YEATS4O95619 227 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 IARSP41252 1262 aaKnown RBP20.24■□□□□ 0.83
DDX28-201ENST00000332395 PPARAQ07869 468 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms