RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SPOPO43791 374 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 FAM89AQ96GI7 184 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 TRIM75PA6NK02 468 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 B4E1Z4 1266 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 NOL3O60936 208 aaKnown RBP11.86□□□□□ -0.51
CLN8-201ENST00000331222 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
CLN8-201ENST00000331222 GPR162Q16538 588 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 FOXD4Q12950 439 aaPredicted RBP11.86□□□□□ -0.51
CLN8-201ENST00000331222 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 INF2Q27J81 1249 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 GSDMBQ8TAX9 411 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 KCNG4Q8TDN1 519 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 MED10Q9BTT4 135 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
CLN8-201ENST00000331222 PDIA4P13667 645 aaKnown RBP11.86□□□□□ -0.51
CLN8-201ENST00000331222 CCDC110Q8TBZ0 833 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
CLN8-201ENST00000331222 LRMPQ12912 555 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 SESTD1Q86VW0 696 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 MYO1AQ9UBC5 1043 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 TXKP42681 527 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 ITIH3Q06033 890 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
CLN8-201ENST00000331222 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
CLN8-201ENST00000331222 MBD4O95243 580 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 SLC8A3P57103 927 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
CLN8-201ENST00000331222 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
CLN8-201ENST00000331222 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 SEL1L2Q5TEA6 688 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 PIK3AP1Q6ZUJ8 805 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 TMTC2Q8N394 836 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 GNAQP50148 359 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
CLN8-201ENST00000331222 SPTLC2O15270 562 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 ITKQ08881 620 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 DYMQ7RTS9 669 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 LPXNO60711 386 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 SPATA17Q96L03 361 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 SEPT10Q9P0V9 454 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 GCNT3O95395 438 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 CCDC121Q6ZUS5 278 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 SMCR8Q8TEV9 937 aaPredicted RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 DDX12PQ92771 950 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 LMTK3Q96Q04 1460 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 TIMM10P62072 90 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 IFT74Q96LB3 600 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
CLN8-201ENST00000331222 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 ADGRL1O94910 1474 aa11.84□□□□□ -0.51
CLN8-201ENST00000331222 SYNJ2BP-COX16A0A087WUM0 186 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 CALML3P27482 149 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 PRPHP41219 470 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 CCDC122Q5T0U0 273 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 DCLK2Q8N568 766 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 COX16Q9P0S2 106 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.51
CLN8-201ENST00000331222 IL2RBP14784 551 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 CNBD1Q8NA66 436 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 SKA2Q8WVK7 121 aaPredicted RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 LMBR1Q8WVP7 490 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 SV2BQ7L1I2 683 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 RSPH3Q86UC2 560 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 MGARPQ8TDB4 240 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 PRDM1O75626 825 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 SAT1P21673 171 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 KCNA4P22459 653 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 PRPF31Q8WWY3 499 aaKnown RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 MYL10Q9BUA6 226 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 TNFAIP3P21580 790 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 GIPC1O14908 333 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
CLN8-201ENST00000331222 ZNF131P52739 623 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 TTC30AQ86WT1 665 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms