RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IP6K1Q92551 441 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 SUGCTQ9HAC7 445 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 FANCLQ9NW38 375 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 PHACTR2O75167 634 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 NCOA5Q9HCD5 579 aaKnown RBP27.82■■■□□ 2.04
SOX1-201ENST00000330949 INTS13Q9NVM9 706 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 CCDC172P0C7W6 258 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 KIF5CO60282 957 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 BRAPQ7Z569 592 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 MICALL1Q8N3F8 863 aa27.82■■■□□ 2.04
SOX1-201ENST00000330949 WWC2Q6AWC2 1192 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 SYNE3Q6ZMZ3 975 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 ZNF274Q96GC6 653 aaPredicted RBP27.81■■■□□ 2.04
SOX1-201ENST00000330949 DESI2Q9BSY9 194 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 LAMA4Q16363 1823 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 RFX7Q2KHR2 1363 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 PIP4K2AP48426 406 aaPredicted RBP27.81■■■□□ 2.04
SOX1-201ENST00000330949 PTPN21Q16825 1174 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 CXorf56Q9H5V9 222 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 C19orf44Q9H6X5 657 aa27.81■■■□□ 2.04
SOX1-201ENST00000330949 SYKP43405 635 aa27.8■■■□□ 2.04
SOX1-201ENST00000330949 ADKP55263 362 aaKnown RBP27.8■■■□□ 2.04
SOX1-201ENST00000330949 MYSM1Q5VVJ2 828 aa27.8■■■□□ 2.04
SOX1-201ENST00000330949 AFAP1L1Q8TED9 768 aa27.8■■■□□ 2.04
SOX1-201ENST00000330949 MRPL44Q9H9J2 332 aaKnown RBP27.8■■■□□ 2.04
SOX1-201ENST00000330949 RNF216Q9NWF9 866 aaPredicted RBP27.8■■■□□ 2.04
SOX1-201ENST00000330949 CEP83Q9Y592 693 aa27.8■■■□□ 2.04
SOX1-201ENST00000330949 STOX1Q6ZVD7 989 aa27.8■■■□□ 2.04
SOX1-201ENST00000330949 POLR3DP05423 398 aaPredicted RBP27.79■■■□□ 2.04
SOX1-201ENST00000330949 VSNL1P62760 191 aa27.79■■■□□ 2.04
SOX1-201ENST00000330949 C1orf141Q5JVX7 400 aa27.79■■■□□ 2.04
SOX1-201ENST00000330949 CTCFLQ8NI51 663 aaPredicted RBP27.79■■■□□ 2.04
SOX1-201ENST00000330949 VIPAS39Q9H9C1 493 aa27.79■■■□□ 2.04
SOX1-201ENST00000330949 PDIA3P30101 505 aaKnown RBP27.78■■■□□ 2.04
SOX1-201ENST00000330949 MCMDC2Q4G0Z9 681 aa27.78■■■□□ 2.04
SOX1-201ENST00000330949 IRX2Q9BZI1 471 aaPredicted RBP27.78■■■□□ 2.04
SOX1-201ENST00000330949 USP8P40818 1118 aa27.78■■■□□ 2.04
SOX1-201ENST00000330949 EXOSC10Q01780 885 aaKnown RBP27.78■■■□□ 2.04
SOX1-201ENST00000330949 SLC39A6Q13433 755 aa27.78■■■□□ 2.04
SOX1-201ENST00000330949 CCDC9Q9Y3X0 531 aaKnown RBP27.78■■■□□ 2.04
SOX1-201ENST00000330949 ERLIN2O94905 339 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 MYL6BP14649 208 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 ANO1Q5XXA6 986 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 ANKRD20A12PQ8NF67 263 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 PPFIA3O75145 1194 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 RNF40O75150 1001 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 RHOXF2BP0C7M4 288 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 FDPSP14324 419 aaKnown RBP27.77■■■□□ 2.04
SOX1-201ENST00000330949 C8orf76Q96K31 380 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 RHOXF2Q9BQY4 288 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 LZTFL1Q9NQ48 299 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 CT47A1Q5JQC4 288 aaPredicted RBP27.77■■■□□ 2.04
SOX1-201ENST00000330949 ARHGEF25Q86VW2 580 aa27.77■■■□□ 2.04
SOX1-201ENST00000330949 EDC3Q96F86 508 aaKnown RBP27.77■■■□□ 2.04
SOX1-201ENST00000330949 CEMIPQ8WUJ3 1361 aa27.76■■■□□ 2.04
SOX1-201ENST00000330949 CTAGE15A4D2H0 777 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 CTAGE8P0CG41 777 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 MAP2K2P36507 400 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 KIF4BQ2VIQ3 1234 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 CCDC129Q6ZRS4 1044 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 CTAGE6Q86UF2 777 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 CTAGE4Q8IX94 777 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 PLEKHA4Q9H4M7 779 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 ZNF609O15014 1411 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 CTAGE9A4FU28 777 aa27.76■■■□□ 2.03
SOX1-201ENST00000330949 AARSP49588 968 aaKnown RBP eCLIP27.76■■■□□ 2.03
SOX1-201ENST00000330949 DBF4Q9UBU7 674 aaPredicted RBP27.76■■■□□ 2.03
SOX1-201ENST00000330949 MROH7-TTC4A0A0A0MT08 1334 aa27.75■■■□□ 2.03
SOX1-201ENST00000330949 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
SOX1-201ENST00000330949 LRRIQ3A6PVS8 624 aaPredicted RBP27.75■■■□□ 2.03
SOX1-201ENST00000330949 ATP5JP18859 108 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 ATP6V1AP38606 617 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 DONSONQ9NYP3 566 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 PNOCQ13519 176 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 WHAMMP3Q1A5X7 153 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 PLEKHO1Q53GL0 409 aaPredicted RBP27.74■■■□□ 2.03
SOX1-201ENST00000330949 PANX2Q96RD6 677 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 NAA15Q9BXJ9 866 aaKnown RBP27.74■■■□□ 2.03
SOX1-201ENST00000330949 NDUFB9Q9Y6M9 179 aa27.74■■■□□ 2.03
SOX1-201ENST00000330949 WDR93Q6P2C0 686 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 ZNF622Q969S3 477 aaKnown RBP eCLIP27.73■■■□□ 2.03
SOX1-201ENST00000330949 AXIN2Q9Y2T1 843 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 ADGRG1Q9Y653 693 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 CCDC196A0A1B0GTZ2 297 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 AKAP4Q5JQC9 854 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 HPSEQ9Y251 543 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 MED1Q15648 1581 aaPredicted RBP27.73■■■□□ 2.03
SOX1-201ENST00000330949 RNMTO43148 476 aaKnown RBP27.73■■■□□ 2.03
SOX1-201ENST00000330949 KIF1CO43896 1103 aaKnown RBP27.73■■■□□ 2.03
SOX1-201ENST00000330949 ZNF569Q5MCW4 686 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 SUCLG2Q96I99 432 aa27.73■■■□□ 2.03
SOX1-201ENST00000330949 MNAT1P51948 309 aa27.72■■■□□ 2.03
SOX1-201ENST00000330949 SLC39A14Q15043 492 aa27.72■■■□□ 2.03
SOX1-201ENST00000330949 OTUD7BQ6GQQ9 843 aa27.72■■■□□ 2.03
SOX1-201ENST00000330949 RGPD2P0DJD1 1756 aa27.72■■■□□ 2.03
SOX1-201ENST00000330949 ZC3H6P61129 1189 aaKnown RBP27.72■■■□□ 2.03
SOX1-201ENST00000330949 MTF1Q14872 753 aa27.72■■■□□ 2.03
SOX1-201ENST00000330949 RPAINQ86UA6 219 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms