RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 MRPS27Q92552 414 aaKnown RBP16.97■□□□□ 0.31
TPM3-206ENST00000330188 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 TACC3Q9Y6A5 838 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 RXRAP19793 462 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 CTDSPL2Q05D32 466 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
TPM3-206ENST00000330188 STK38Q15208 465 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
TPM3-206ENST00000330188 KCNG4Q8TDN1 519 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
TPM3-206ENST00000330188 KCNQ2O43526 872 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 CDKL5O76039 1030 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 IQCB1Q15051 598 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 STX1AQ16623 288 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 C11orf57Q6ZUT1 292 aaPredicted RBP16.96■□□□□ 0.31
TPM3-206ENST00000330188 SGMS1Q86VZ5 419 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 PLA2G4DQ86XP0 818 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
TPM3-206ENST00000330188 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.3
TPM3-206ENST00000330188 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.3
TPM3-206ENST00000330188 MICU3Q86XE3 530 aa16.96■□□□□ 0.3
TPM3-206ENST00000330188 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.3
TPM3-206ENST00000330188 AIFM3Q96NN9 605 aa16.96■□□□□ 0.3
TPM3-206ENST00000330188 ALG1Q9BT22 464 aa16.96■□□□□ 0.3
TPM3-206ENST00000330188 ZBTB43O43298 467 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 PRKAB2O43741 272 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 LIFRP42702 1097 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 ZNF75DP51815 510 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 NTRK3Q16288 839 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 C17orf53Q8N3J3 647 aaPredicted RBP16.95■□□□□ 0.3
TPM3-206ENST00000330188 FAM217BQ9NTX9 383 aaPredicted RBP16.95■□□□□ 0.3
TPM3-206ENST00000330188 ZSWIM5Q9P217 1185 aa16.95■□□□□ 0.3
TPM3-206ENST00000330188 TAF1P21675 1872 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 SPTLC2O15270 562 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 GNAT2P19087 354 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 SF3A1Q15459 793 aaKnown RBP16.94■□□□□ 0.3
TPM3-206ENST00000330188 AKNAD1Q5T1N1 836 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
TPM3-206ENST00000330188 CNNM2Q9H8M5 875 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 SPTLC3Q9NUV7 552 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 A0A1B0GVL5 298 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 NDUFA8P51970 172 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 SYNE3Q6ZMZ3 975 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 NFXL1Q6ZNB6 911 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
TPM3-206ENST00000330188 PHKBQ93100 1093 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 CDC5LQ99459 802 aaKnown RBP16.94■□□□□ 0.3
TPM3-206ENST00000330188 TRIM5Q9C035 493 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 SLC4A4Q9Y6R1 1079 aa16.94■□□□□ 0.3
TPM3-206ENST00000330188 GOLGA8AA7E2F4 631 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 STAG1Q8WVM7 1258 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 PYCARDQ9ULZ3 195 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 ZNF804BA4D1E1 1349 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
TPM3-206ENST00000330188 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
TPM3-206ENST00000330188 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
TPM3-206ENST00000330188 TDO2P48775 406 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 KRT40Q6A162 431 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 MFSD6Q6ZSS7 791 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 KIAA1524Q8TCG1 905 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 KRT23Q9C075 422 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
TPM3-206ENST00000330188 NID2Q14112 1375 aa16.92■□□□□ 0.3
TPM3-206ENST00000330188 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
TPM3-206ENST00000330188 PTGS1P23219 599 aa16.92■□□□□ 0.3
TPM3-206ENST00000330188 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
TPM3-206ENST00000330188 ANO10Q9NW15 660 aa16.92■□□□□ 0.3
TPM3-206ENST00000330188 A0A087WWV3 80 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 IARSP41252 1262 aaKnown RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 SARM1Q6SZW1 724 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 MIGA1Q8NAN2 632 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 COL1A1P02452 1464 aaPredicted RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 STK36Q9NRP7 1315 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 GOLGA6L19H0YKK7 550 aa16.91■□□□□ 0.3
TPM3-206ENST00000330188 DHX40Q8IX18 779 aaKnown RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 IQSEC3Q9UPP2 1182 aaPredicted RBP16.91■□□□□ 0.3
TPM3-206ENST00000330188 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 UQCRHLA0A096LP55 91 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 UQCRHP07919 91 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 CDC25BP30305 580 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 SLC39A14Q15043 492 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms