RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 NOP2P46087 812 aaKnown RBP12.94□□□□□ -0.34
GINS3-202ENST00000328514 PTPAQ15257 358 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
GINS3-202ENST00000328514 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
GINS3-202ENST00000328514 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 MAST3O60307 1309 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 SHC4Q6S5L8 630 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 HDXQ7Z353 690 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 DHX58Q96C10 678 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
GINS3-202ENST00000328514 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 CUTAO60888 179 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 NT5DC1Q5TFE4 455 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 PANX2Q96RD6 677 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 LCMT1Q9UIC8 334 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 LMAN1P49257 510 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 CASP7P55210 303 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 MDM2Q00987 491 aaPredicted RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 ENOX1Q8TC92 643 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
GINS3-202ENST00000328514 YY1AP1Q9H869 796 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 ANKZF1Q9H8Y5 726 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
GINS3-202ENST00000328514 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 GOLIM4O00461 696 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 ERLIN1O75477 346 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
GINS3-202ENST00000328514 CCDC175P0C221 793 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 PNOCQ13519 176 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
GINS3-202ENST00000328514 MYD88Q99836 296 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
GINS3-202ENST00000328514 CDC23Q9UJX2 597 aa12.91□□□□□ -0.34
GINS3-202ENST00000328514 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 BMP6P22004 513 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
GINS3-202ENST00000328514 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
GINS3-202ENST00000328514 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 C5P01031 1676 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 CPDO75976 1380 aa12.9□□□□□ -0.34
GINS3-202ENST00000328514 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 GOLGA8BA8MQT2 603 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 CPLX1O14810 134 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 TRIM66O15016 1216 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 PPFIA3O75145 1194 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.35
GINS3-202ENST00000328514 NR1I3Q14994 352 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.35
GINS3-202ENST00000328514 COPS6Q7L5N1 327 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 CHST3Q7LGC8 479 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.35
GINS3-202ENST00000328514 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.35
GINS3-202ENST00000328514 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 FOXP2O15409 715 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 PRC1O43663 620 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 FECHP22830 423 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 MAGEA9P43362 315 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 PDE4BQ07343 736 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 FAM177A1Q8N128 213 aaPredicted RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms