RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 ARAP2Q8WZ64 1704 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-201ENST00000327154 HOOK2Q96ED9 719 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
RPAIN-201ENST00000327154 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 A0A1B0GUL7 405 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
RPAIN-201ENST00000327154 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 BRI3BPQ8WY22 251 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 SNCAIPQ9Y6H5 919 aa17.5■□□□□ 0.39
RPAIN-201ENST00000327154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
RPAIN-201ENST00000327154 CCL15-CCL14A0A0B4J2E2 113 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 NFIAQ12857 509 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 RASGRF1Q13972 1273 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 CCL15Q16663 113 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 TRIM17Q9Y577 477 aa17.49■□□□□ 0.39
RPAIN-201ENST00000327154 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ERO1BQ86YB8 467 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
RPAIN-201ENST00000327154 TMEM57Q8N5G2 664 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 FAM198AQ9UFP1 575 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
RPAIN-201ENST00000327154 ZBTB22O15209 634 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
RPAIN-201ENST00000327154 OTOP1Q7RTM1 612 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 ZFPM1Q8IX07 1006 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 FAM43AQ8N2R8 423 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
RPAIN-201ENST00000327154 IRF6O14896 467 aa17.46■□□□□ 0.39
RPAIN-201ENST00000327154 CETPP11597 493 aa17.46■□□□□ 0.39
RPAIN-201ENST00000327154 INPP5BP32019 993 aa17.46■□□□□ 0.39
RPAIN-201ENST00000327154 SP3Q02447 781 aa17.46■□□□□ 0.39
RPAIN-201ENST00000327154 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPAIN-201ENST00000327154 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-201ENST00000327154 DZIP1Q86YF9 867 aaKnown RBP17.46■□□□□ 0.39
RPAIN-201ENST00000327154 ZFYVE28Q9HCC9 887 aa17.46■□□□□ 0.39
RPAIN-201ENST00000327154 RPAP1Q9BWH6 1393 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-201ENST00000327154 SNAPC2Q13487 334 aa17.45■□□□□ 0.38
RPAIN-201ENST00000327154 GORABQ5T7V8 394 aa17.45■□□□□ 0.38
RPAIN-201ENST00000327154 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-201ENST00000327154 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
RPAIN-201ENST00000327154 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
RPAIN-201ENST00000327154 PPATQ06203 517 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 PPIL2Q13356 520 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 FAM163AQ96GL9 167 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-201ENST00000327154 EFCC1Q9HA90 598 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 GAKO14976 1311 aa17.44■□□□□ 0.38
RPAIN-201ENST00000327154 OTOFQ9HC10 1997 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 RGS3P49796 1198 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 CAP1Q01518 475 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 MECOMQ03112 1051 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 IDI2Q9BXS1 227 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 PTPN22Q9Y2R2 807 aa17.43■□□□□ 0.38
RPAIN-201ENST00000327154 ENTPD3O75355 529 aa17.42■□□□□ 0.38
RPAIN-201ENST00000327154 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
RPAIN-201ENST00000327154 PI16Q6UXB8 463 aa17.42■□□□□ 0.38
RPAIN-201ENST00000327154 ZSCAN29Q8IWY8 852 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-201ENST00000327154 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-201ENST00000327154 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-201ENST00000327154 BTDP43251 543 aa17.41■□□□□ 0.38
RPAIN-201ENST00000327154 POLA2Q14181 598 aa17.41■□□□□ 0.38
RPAIN-201ENST00000327154 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
RPAIN-201ENST00000327154 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
RPAIN-201ENST00000327154 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
RPAIN-201ENST00000327154 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
RPAIN-201ENST00000327154 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 TLR2O60603 784 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 RLBP1P12271 317 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 PICALMQ13492 652 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
RPAIN-201ENST00000327154 SSH3Q8TE77 659 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 ZCCHC17Q9NP64 241 aaKnown RBP17.4■□□□□ 0.38
RPAIN-201ENST00000327154 DDX4Q9NQI0 724 aaKnown RBP17.4■□□□□ 0.38
RPAIN-201ENST00000327154 MROH7-TTC4A0A0A0MT08 1334 aa17.4■□□□□ 0.38
RPAIN-201ENST00000327154 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
RPAIN-201ENST00000327154 LAMB1P07942 1786 aa17.39■□□□□ 0.37
RPAIN-201ENST00000327154 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-201ENST00000327154 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
RPAIN-201ENST00000327154 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-201ENST00000327154 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
RPAIN-201ENST00000327154 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
RPAIN-201ENST00000327154 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-201ENST00000327154 MCAMP43121 646 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 454 ms