RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PBX4Q9BYU1 374 aa8.82□□□□□ -1
CSTF3-201ENST00000323959 CACNA1GO43497 2377 aa8.82□□□□□ -1
CSTF3-201ENST00000323959 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
CSTF3-201ENST00000323959 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
CSTF3-201ENST00000323959 HSP90AB3PQ58FF7 597 aa8.82□□□□□ -1
CSTF3-201ENST00000323959 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
CSTF3-201ENST00000323959 PRR23AA6NEV1 266 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 BTBD11A6QL63 1104 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 RASA3Q14644 834 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 CDCA8Q53HL2 280 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 RASIP1Q5U651 963 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 LHX8Q68G74 356 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 HFE2Q6ZVN8 426 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 IRF6O14896 467 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 IL13P35225 146 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 FPGSQ05932 587 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 CELF1Q92879 486 aaKnown RBP8.81□□□□□ -1
CSTF3-201ENST00000323959 CARD14Q9BXL6 1004 aa8.81□□□□□ -1
CSTF3-201ENST00000323959 DNM1LO00429 736 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 DSG3P32926 999 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 SENP6Q9GZR1 1112 aaPredicted RBP8.8□□□□□ -1
CSTF3-201ENST00000323959 XDHP47989 1333 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 KIAA0355O15063 1070 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 MOGSQ13724 837 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 IL17REQ8NFR9 667 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 COA1Q9GZY4 146 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 PRDM5Q9NQX1 630 aaPredicted RBP8.8□□□□□ -1
CSTF3-201ENST00000323959 ATP11BQ9Y2G3 1177 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 PLXNB2O15031 1838 aa8.8□□□□□ -1
CSTF3-201ENST00000323959 PRKAR2AP13861 404 aaKnown RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 HCLS1P14317 486 aaPredicted RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 GAS2L2Q8NHY3 880 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 ATOH1Q92858 354 aaPredicted RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 MSCO60682 206 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 SPDYE6P0CI01 402 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 RPS8P62241 208 aaKnown RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
CSTF3-201ENST00000323959 CCDC129Q6ZRS4 1044 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 UPF3BQ9BZI7 483 aaKnown RBP8.79□□□□□ -1
CSTF3-201ENST00000323959 TRPC6Q9Y210 931 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 AK9Q5TCS8 1911 aa8.79□□□□□ -1
CSTF3-201ENST00000323959 SOBPA7XYQ1 873 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 XRCC5P13010 732 aaKnown RBP8.78□□□□□ -1
CSTF3-201ENST00000323959 SLC5A1P13866 664 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 PUM1Q14671 1186 aaKnown RBP eCLIP8.78□□□□□ -1
CSTF3-201ENST00000323959 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 ANKIB1Q9P2G1 1089 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 MTCH2Q9Y6C9 303 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 CXCL11O14625 94 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 KCNQ3O43525 872 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 TNNI2P48788 182 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 EPHB4P54760 987 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 TEPSINQ96N21 525 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 JAG2Q9Y219 1238 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 CHD8Q9HCK8 2581 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 FKBP1AP62942 108 aaKnown RBP8.78□□□□□ -1
CSTF3-201ENST00000323959 LEXMQ3ZCV2 418 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 ASCL5Q7RTU5 278 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 VEZTQ9HBM0 779 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 GJD2Q9UKL4 321 aa8.78□□□□□ -1
CSTF3-201ENST00000323959 COL4A6Q14031 1691 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 TRIM43BA6NCK2 446 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 NBL1P41271 181 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 TRIM32Q13049 653 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 FASTKD5Q7L8L6 764 aaKnown RBP8.77□□□□□ -1.01
CSTF3-201ENST00000323959 TRIM43Q96BQ3 446 aaPredicted RBP8.77□□□□□ -1.01
CSTF3-201ENST00000323959 SLC28A3Q9HAS3 691 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 TACC3Q9Y6A5 838 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 ZNF521Q96K83 1311 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 FAM110CQ1W6H9 321 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 TRIB2Q92519 343 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 PRKAG3Q9UGI9 489 aa8.77□□□□□ -1.01
CSTF3-201ENST00000323959 ATRXP46100 2492 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 PBX2P40425 430 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 EPHA10Q5JZY3 1008 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 MCTP2Q6DN12 878 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 KIAA0825Q8IV33 1275 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 SUGP1Q8IWZ8 645 aaKnown RBP8.76□□□□□ -1.01
CSTF3-201ENST00000323959 SOCS4Q8WXH5 440 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 MXD3Q9BW11 206 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 NKX2-4Q9H2Z4 354 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 CFAP100Q494V2 611 aa8.76□□□□□ -1.01
CSTF3-201ENST00000323959 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.76□□□□□ -1.01
CSTF3-201ENST00000323959 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
CSTF3-201ENST00000323959 ZKSCAN1P17029 563 aaPredicted RBP8.75□□□□□ -1.01
CSTF3-201ENST00000323959 IRS1P35568 1242 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 PPIGQ13427 754 aaKnown RBP eCLIP8.75□□□□□ -1.011e-19■□□□□ 10.2
CSTF3-201ENST00000323959 NBPF20Q3BBV1 942 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 LPAR1Q92633 364 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 CLRN2A0PK11 232 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 447.7 ms