RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 CPLX1O14810 134 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 F13A1P00488 732 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 HMGB1P09429 215 aaKnown RBP10.73□□□□□ -0.69
CD46-202ENST00000322918 PDIA3P30101 505 aaKnown RBP10.73□□□□□ -0.69
CD46-202ENST00000322918 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 NACAP1Q9BZK3 213 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 MTMR6Q9Y217 621 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 TACC3Q9Y6A5 838 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 G3V3G9 751 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 RANBP6O60518 1105 aaKnown RBP10.72□□□□□ -0.69
CD46-202ENST00000322918 CHRNA5P30532 468 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 EXOSC10Q01780 885 aaKnown RBP10.72□□□□□ -0.69
CD46-202ENST00000322918 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 GPT2Q8TD30 523 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 MXD3Q9BW11 206 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 POLLQ9UGP5 575 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 GGA1Q9UJY5 639 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
CD46-202ENST00000322918 ADD1P35611 737 aaKnown RBP10.72□□□□□ -0.69
CD46-202ENST00000322918 MFSD6Q6ZSS7 791 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
CD46-202ENST00000322918 PPP1R1BQ9UD71 204 aaPredicted RBP10.72□□□□□ -0.69
CD46-202ENST00000322918 XDHP47989 1333 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 CYP2D6P10635 497 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 TMEM67Q5HYA8 995 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 USP17L21D6R901 530 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 MB21D2Q8IYB1 491 aaPredicted RBP10.71□□□□□ -0.69
CD46-202ENST00000322918 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 NLGN1Q8N2Q7 840 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 PHKBQ93100 1093 aa10.71□□□□□ -0.69
CD46-202ENST00000322918 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.69
CD46-202ENST00000322918 NSUN4Q96CB9 384 aaKnown RBP10.71□□□□□ -0.7
CD46-202ENST00000322918 AIFM3Q96NN9 605 aa10.71□□□□□ -0.7
CD46-202ENST00000322918 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.7
CD46-202ENST00000322918 RREB1Q92766 1687 aa10.71□□□□□ -0.7
CD46-202ENST00000322918 BCORQ6W2J9 1755 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 PNPLA7Q6ZV29 1317 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
CD46-202ENST00000322918 PPEF1O14829 653 aaPredicted RBP10.7□□□□□ -0.7
CD46-202ENST00000322918 CTDNEP1O95476 244 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
CD46-202ENST00000322918 GTF2IP78347 998 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 GAS2L3Q86XJ1 694 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 TAF1LQ8IZX4 1826 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 PLSCR1O15162 318 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 FAM47AQ5JRC9 791 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 ZNF804AQ7Z570 1209 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
CD46-202ENST00000322918 PPARAQ07869 468 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 NSUN7Q8NE18 718 aaKnown RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 SYCE3A1L190 88 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 NMT2O60551 498 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 POLR3DP05423 398 aaPredicted RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 USP5P45974 858 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 MFSD14BQ5SR56 506 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 AKNAD1Q5T1N1 836 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 RIOK1Q9BRS2 568 aaKnown RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 A0A0U1RQG5 324 aaPredicted RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 PFKFB2O60825 505 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 SCNN1DP51172 638 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 MAPKAPK5Q8IW41 473 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 CD209Q9NNX6 404 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 KCNQ5Q9NR82 932 aa10.69□□□□□ -0.7
CD46-202ENST00000322918 ANGEL1Q9UNK9 670 aaKnown RBP10.69□□□□□ -0.7
CD46-202ENST00000322918 LY75O60449 1722 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 METAP2P50579 478 aaKnown RBP eCLIP10.68□□□□□ -0.7
CD46-202ENST00000322918 SKOR2Q2VWA4 1001 aaPredicted RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 TGFBRAP1Q8WUH2 860 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 TMEM63CQ9P1W3 806 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 CCDC69A6NI79 296 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 KLHL40Q2TBA0 621 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 DPP8Q6V1X1 898 aaPredicted RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 RNF214Q8ND24 703 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 DYNLL2Q96FJ2 89 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 UBAC1Q9BSL1 405 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 ZC3H12CQ9C0D7 883 aaKnown RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 TMX4Q9H1E5 349 aaPredicted RBP10.68□□□□□ -0.7
CD46-202ENST00000322918 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 LRP5O75197 1615 aa10.68□□□□□ -0.7
CD46-202ENST00000322918 SRGNP10124 158 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 PDCP20941 246 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms