RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 N4BP3O15049 544 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 TAOK1Q7L7X3 1001 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
COL12A1-201ENST00000322507 PPIP5K1Q6PFW1 1433 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 KIF2CQ99661 725 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 OPHN1O60890 802 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL12A1-201ENST00000322507 STAT6P42226 847 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 NOP2P46087 812 aaKnown RBP10.86□□□□□ -0.67
COL12A1-201ENST00000322507 UBASH3AP57075 661 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 CNGA4Q8IV77 575 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 KDM5BQ9UGL1 1544 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 SNX16P57768 344 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 ESRRGP62508 458 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 ABTB1Q969K4 478 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-201ENST00000322507 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 GJB2P29033 226 aa10.86□□□□□ -0.67
COL12A1-201ENST00000322507 GNA11P29992 359 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 TSC22D3Q99576 134 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 GNG11P61952 73 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 NPHP3Q7Z494 1330 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 CCDC82Q8N4S0 544 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 MTRF1LQ9UGC7 380 aaKnown RBP10.85□□□□□ -0.67
COL12A1-201ENST00000322507 EIF4G3O43432 1585 aaKnown RBP10.85□□□□□ -0.67
COL12A1-201ENST00000322507 TRIM27P14373 513 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 DACT3Q96B18 629 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-201ENST00000322507 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 KRT5P13647 590 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 TMEM87AQ8NBN3 555 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 WTAPQ15007 396 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 FAM186BQ8IYM0 893 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 DYTNA2CJ06 578 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 KRT75O95678 551 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 CCDC122Q5T0U0 273 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 WASLO00401 505 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-201ENST00000322507 SH3BP5O60239 455 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 PHEXP78562 749 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 ATP6V1E2Q96A05 226 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 TBC1D9Q6ZT07 1266 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 EFCAB13Q8IY85 973 aa10.85□□□□□ -0.67
COL12A1-201ENST00000322507 MAP7D3Q8IWC1 876 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 ZMYND8Q9ULU4 1186 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 RPL13P26373 211 aaKnown RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TSPY1Q01534 308 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 VWA3BQ502W6 1294 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 IFT81Q8WYA0 676 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 FANCAO15360 1455 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 GAS8O95995 478 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 STX17P56962 302 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TRIM55Q9BYV6 548 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 TRMT112Q9UI30 125 aaKnown RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 ZBTB43O43298 467 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 AFAP1L2Q8N4X5 818 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 ST5P78524 1137 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 PLB1Q6P1J6 1458 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 POLD1P28340 1107 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 GOLGA5Q8TBA6 731 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 SCOCQ9UIL1 159 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 GMEB1Q9Y692 573 aa10.84□□□□□ -0.67
COL12A1-201ENST00000322507 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL12A1-201ENST00000322507 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 GPR161Q8N6U8 529 aaKnown RBP10.83□□□□□ -0.68
COL12A1-201ENST00000322507 C6orf50Q9HD87 102 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 EVI5O60447 810 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 CFAP157Q5JU67 520 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 PPP2R5BQ15173 497 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 PPP4R4Q6NUP7 873 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 ORC3Q9UBD5 711 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-201ENST00000322507 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 IFNL2Q8IZJ0 200 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 CAPN9O14815 690 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-201ENST00000322507 SH3GL2Q99962 352 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 ANLNQ9NQW6 1124 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 DNAJC17Q9NVM6 304 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms