RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RHOXF2Q9BQY4 288 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 IGHMBP2P38935 993 aaKnown RBP14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 CHMP4BP1P59074 171 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 RILPL1Q5EBL4 403 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 SPECC1LQ69YQ0 1117 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 KRBA2Q6ZNG9 492 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 PPP2R2CQ9Y2T4 447 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 SH3TC1Q8TE82 1336 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 FGAP02671 866 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 TUBB4BP68371 445 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 GPR161Q8N6U8 529 aaKnown RBP14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 IGSF22Q8N9C0 903 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 MAST3O60307 1309 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 BMP15O95972 392 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 IVLP07476 585 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 ZAP70P43403 619 aa14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.08
DNMT3A-202ENST00000321117 IKBKBO14920 756 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 NLRP5P59047 1200 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 SPA17Q15506 151 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 TRMT44Q8IYL2 757 aaKnown RBP14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 PHACTR2O75167 634 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 SMC1AQ14683 1233 aaKnown RBP14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 POSTNQ15063 836 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 MYL10Q9BUA6 226 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
DNMT3A-202ENST00000321117 CLCN6P51797 869 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 SLC39A14Q15043 492 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 HDXQ7Z353 690 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 CNGA4Q8IV77 575 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 CDK5RAP3Q96JB5 506 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 MORC2Q9Y6X9 1032 aaPredicted RBP14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 WDHD1O75717 1129 aaPredicted RBP14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 SMARCC2Q8TAQ2 1214 aa14.51□□□□□ -0.09
DNMT3A-202ENST00000321117 ZCRB1Q8TBF4 217 aaKnown RBP14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 FAM89AQ96GI7 184 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 TMEM131LA2VDJ0 1609 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 A1BGP04217 495 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 CTR9Q6PD62 1173 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 CLIC6Q96NY7 704 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 PYM1Q9BRP8 204 aaKnown RBP14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 DESI2Q9BSY9 194 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 PCDHA5Q9Y5H7 936 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 KIAA0754O94854 1291 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 FMR1NBQ8N0W7 255 aaPredicted RBP14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 KCNB2Q92953 911 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 CABP5Q9NP86 173 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 PHLPP2Q6ZVD8 1323 aa14.5□□□□□ -0.09
DNMT3A-202ENST00000321117 ATP1A3P13637 1013 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 C10orf67Q8IYJ2 551 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 CABLES1Q8TDN4 633 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 TEX13AQ9BXU3 409 aaPredicted RBP14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 PREX1Q8TCU6 1659 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 TUBBP07437 444 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 EPS15P42566 896 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 PDE4CQ08493 712 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 LUC7LQ9NQ29 371 aaKnown RBP14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 GOLGA8FQ08AF8 430 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 GOLGA8DPQ0D2H9 430 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 FCHSD1Q86WN1 690 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 DHX40Q8IX18 779 aaKnown RBP14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 NEK11Q8NG66 645 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 ESR2Q92731 530 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 TANGO6Q9C0B7 1094 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 RSPH14Q9UHP6 348 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 PHKG2P15735 406 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
DNMT3A-202ENST00000321117 CCT6AP40227 531 aaKnown RBP14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 PTPN21Q16825 1174 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 FKBP15Q5T1M5 1219 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 GPR108Q9NPR9 543 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 RMND1Q9NWS8 449 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 GUCA1BQ9UMX6 200 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 EHBP1Q8NDI1 1231 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 JADE2Q9NQC1 790 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 SERTAD1Q9UHV2 236 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 PRDM4Q9UKN5 801 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 SHTN1A0MZ66 631 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 USO1O60763 962 aaKnown RBP14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 MBD4O95243 580 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 PNMA6AP0CW24 399 aaPredicted RBP14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 CCZ1BP86790 482 aa14.48□□□□□ -0.09
DNMT3A-202ENST00000321117 CCZ1P86791 482 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms