RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
RTL3-201ENST00000321110 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
RTL3-201ENST00000321110 MCM8Q9UJA3 840 aa9.08□□□□□ -0.96
RTL3-201ENST00000321110 CAPN7Q9Y6W3 813 aa9.08□□□□□ -0.96
RTL3-201ENST00000321110 SPTLC2O15270 562 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 KIF5CO60282 957 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 PDE4BQ07343 736 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 DDR1Q08345 913 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 KRT32Q14532 448 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 SPECC1LQ69YQ0 1117 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 OTUD7BQ6GQQ9 843 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTCFLQ8NI51 663 aaPredicted RBP9.07□□□□□ -0.96
RTL3-201ENST00000321110 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 ZKSCAN4Q969J2 545 aaPredicted RBP9.07□□□□□ -0.96
RTL3-201ENST00000321110 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
RTL3-201ENST00000321110 MON2Q7Z3U7 1717 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 GRIN2DO15399 1336 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
RTL3-201ENST00000321110 ITSN1Q15811 1721 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTAGE15A4D2H0 777 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 AGPSO00116 658 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 ABL1P00519 1130 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTAGE8P0CG41 777 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CDC27P30260 824 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 GGCXP38435 758 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTAGE6Q86UF2 777 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTAGE4Q8IX94 777 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 BCAS4Q8TDM0 211 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 BOLA2Q9H3K6 86 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
RTL3-201ENST00000321110 CTAGE9A4FU28 777 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 POLR3DP05423 398 aaPredicted RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 CYP21A2P08686 494 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 TUBB4BP68371 445 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 PNOCQ13519 176 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 NEDD9Q14511 834 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 STOX1Q6ZVD7 989 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
RTL3-201ENST00000321110 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 KCNG4Q8TDN1 519 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 EAF2Q96CJ1 260 aaPredicted RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 GDAP1L1Q96MZ0 367 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 CDC5LQ99459 802 aaKnown RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 TACO1Q9BSH4 297 aaKnown RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 CCDC8Q9H0W5 538 aaPredicted RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 SAMM50Q9Y512 469 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 A2ML1A8K2U0 1454 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 YEATS4O95619 227 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 CHGBP05060 677 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 FDPSP14324 419 aaKnown RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 BMP6P22004 513 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 NCAPH2Q6IBW4 605 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 FAM76AQ8TAV0 307 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 N4BP2L2Q92802 583 aaPredicted RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 EDC3Q96F86 508 aaKnown RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 TEX13AQ9BXU3 409 aaPredicted RBP9.06□□□□□ -0.96
RTL3-201ENST00000321110 POLR3EQ9NVU0 708 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 MAP3K19Q56UN5 1328 aa9.06□□□□□ -0.96
RTL3-201ENST00000321110 AKAP12Q02952 1782 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 GOLIM4O00461 696 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 TUBBP07437 444 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 PAX7P23759 505 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 CMA1P23946 247 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
RTL3-201ENST00000321110 STIM1Q13586 685 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 PREPLQ4J6C6 727 aaPredicted RBP9.05□□□□□ -0.96
RTL3-201ENST00000321110 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 COG1Q8WTW3 980 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 CARMIL3Q8ND23 1372 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 EIF3HO15372 352 aaKnown RBP eCLIP9.05□□□□□ -0.96
RTL3-201ENST00000321110 MYO1BO43795 1136 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
RTL3-201ENST00000321110 TAF7Q15545 349 aaPredicted RBP9.05□□□□□ -0.96
RTL3-201ENST00000321110 C11orf91Q3C1V1 193 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 CCDC129Q6ZRS4 1044 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
RTL3-201ENST00000321110 TBC1D22AQ8WUA7 517 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 SLC24A3Q9HC58 644 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 C3P01024 1663 aa9.05□□□□□ -0.96
RTL3-201ENST00000321110 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 SASH1O94885 1247 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 FSBPO95073 299 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 ZNF18P17022 549 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 AMPD2Q01433 879 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 ATP2B2Q01814 1243 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 AKAP17AQ02040 695 aaKnown RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 TTC19Q6DKK2 380 aaPredicted RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 AMOTL1Q8IY63 956 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 NAPGQ99747 312 aaPredicted RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 NRXN3Q9Y4C0 1643 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 SPATA31D1Q6ZQQ2 1576 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms