RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 LRRFIP1Q32MZ4 808 aaKnown RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 ANKRD18AQ8IVF6 992 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 FRAT1Q92837 279 aaPredicted RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 XDHP47989 1333 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 LAMA4Q16363 1823 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 AKAP11Q9UKA4 1901 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 EYA2O00167 538 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 GRIN3BO60391 1043 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 Q3C1V9 767 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 GPATCH3Q96I76 525 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 POLR3EQ9NVU0 708 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 ATP6V0A2Q9Y487 856 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 MYO3BQ8WXR4 1341 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 SALL1Q9NSC2 1324 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 COL2A1P02458 1487 aaPredicted RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 GTF2E1P29083 439 aaPredicted RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 ERFEQ4G0M1 354 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 CCDC93Q567U6 631 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 PTCRAQ6ISU1 281 aaPredicted RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 UBE3BQ7Z3V4 1068 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 SUCLG2Q96I99 432 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 YTHDC1Q96MU7 727 aaKnown RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 OSBPL3Q9H4L5 887 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 PIM2Q9P1W9 311 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 SRP68Q9UHB9 627 aaKnown RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 PCDHGC3Q9UN70 934 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 KDM2BQ8NHM5 1336 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 UQCRFS1P1P0C7P4 283 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 RLBP1P12271 317 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 SLC4A10Q6U841 1118 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 ZGPATQ8N5A5 531 aaKnown RBP4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 TTLL6Q8N841 843 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 MEIS3Q99687 375 aa4.05□□□□□ -1.76
SCAMP1-201ENST00000320280 RPAP1Q9BWH6 1393 aaPredicted RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 F6X3S4 739 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 SNRPBP14678 240 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 SKOR1P84550 965 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 G3BP1Q13283 466 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 C6orf118Q5T5N4 469 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 CRBNQ96SW2 442 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 MRIQ9BWK5 157 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 BICC1Q9H694 974 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 FAM217BQ9NTX9 383 aaPredicted RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 SUPT16HQ9Y5B9 1047 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 PCDHB15Q9Y5E8 787 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 LRRFIP2Q9Y608 721 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 ZNF804BA4D1E1 1349 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 MAST3O60307 1309 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 RPS8P62241 208 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 PTPN12Q05209 780 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 R3HDM1Q15032 1099 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 PUM3Q15397 648 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 CWF19L2Q2TBE0 894 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 C2CD5Q86YS7 1000 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 LPIN2Q92539 896 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 KAZALD1Q96I82 304 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 STAP2Q9UGK3 403 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 DDX60LQ5H9U9 1706 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 COL4A1P02462 1669 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 DGAT1O75907 488 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 ANXA1P04083 346 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 NBPF7P0C2Y1 421 aaPredicted RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 SLC5A1P13866 664 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 ITGA6P23229 1130 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 FKBP4Q02790 459 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 DALRD3Q5D0E6 543 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 VGLL2Q8N8G2 317 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 PRR7Q8TB68 274 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 PANK1Q8TE04 598 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 C7orf43Q8WVR3 580 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 GNL3LQ9NVN8 582 aaKnown RBP4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 COG6Q9Y2V7 657 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 RIPOR2Q9Y4F9 1068 aa4.04□□□□□ -1.76
SCAMP1-201ENST00000320280 IRS2Q9Y4H2 1338 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 HIP1O00291 1037 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 ERC2O15083 957 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 NPHP1O15259 732 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 IFIT1P09914 478 aaKnown RBP4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 FGFR2P21802 821 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 TAF7LQ5H9L4 462 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 LMBR1LQ6UX01 489 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 AMIGO3Q86WK7 504 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 TBC1D22AQ8WUA7 517 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 MPHOSPH8Q99549 860 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 BCL2L13Q9BXK5 485 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 LRRCC1Q9C099 1032 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 MAP10Q9P2G4 905 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 FAM205AQ6ZU69 1335 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 ADAMTSL1Q8N6G6 1762 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 SRGAP3O43295 1099 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 RPS12P25398 132 aaKnown RBP4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 ARID4AP29374 1257 aaPredicted RBP4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 HDLBPQ00341 1268 aaKnown RBP4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 NUCB1Q02818 461 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 TTF1Q15361 905 aaPredicted RBP4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 ZNF804AQ7Z570 1209 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 BAP1Q92560 729 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 COA1Q9GZY4 146 aa4.03□□□□□ -1.76
SCAMP1-201ENST00000320280 CEP126Q9P2H0 1117 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms