RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 TRMT1Q9NXH9 659 aaKnown RBP24.1■■□□□ 1.45
CPNE7-202ENST00000319518 SPTLC2O15270 562 aa24.09■■□□□ 1.45
CPNE7-202ENST00000319518 YEATS4O95619 227 aa24.09■■□□□ 1.45
CPNE7-202ENST00000319518 AXDND1Q5T1B0 1012 aaPredicted RBP24.09■■□□□ 1.45
CPNE7-202ENST00000319518 CCAR2Q8N163 923 aaKnown RBP24.09■■□□□ 1.45
CPNE7-202ENST00000319518 KCNG4Q8TDN1 519 aa24.09■■□□□ 1.45
CPNE7-202ENST00000319518 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
CPNE7-202ENST00000319518 BCL11BQ9C0K0 894 aaPredicted RBP24.09■■□□□ 1.45
CPNE7-202ENST00000319518 NBPF3Q9H094 633 aa24.09■■□□□ 1.45
CPNE7-202ENST00000319518 MYH14Q7Z406 1995 aaKnown RBP24.09■■□□□ 1.45
CPNE7-202ENST00000319518 MYH3P11055 1940 aa24.08■■□□□ 1.45
CPNE7-202ENST00000319518 SNAP23O00161 211 aa24.08■■□□□ 1.45
CPNE7-202ENST00000319518 OSBPL5Q9H0X9 879 aaPredicted RBP24.08■■□□□ 1.45
CPNE7-202ENST00000319518 TOM1O60784 492 aa24.08■■□□□ 1.44
CPNE7-202ENST00000319518 SMIM5Q71RC9 77 aa24.08■■□□□ 1.44
CPNE7-202ENST00000319518 VGLL2Q8N8G2 317 aa24.08■■□□□ 1.44
CPNE7-202ENST00000319518 APPBP2Q92624 585 aa24.08■■□□□ 1.44
CPNE7-202ENST00000319518 CHMP4CQ96CF2 233 aa24.08■■□□□ 1.44
CPNE7-202ENST00000319518 NAT10Q9H0A0 1025 aaKnown RBP24.08■■□□□ 1.44
CPNE7-202ENST00000319518 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
CPNE7-202ENST00000319518 ZFYP08048 801 aaPredicted RBP24.07■■□□□ 1.44
CPNE7-202ENST00000319518 MCAMP43121 646 aa24.07■■□□□ 1.44
CPNE7-202ENST00000319518 SF3A1Q15459 793 aaKnown RBP24.07■■□□□ 1.44
CPNE7-202ENST00000319518 PTPN14Q15678 1187 aa24.07■■□□□ 1.44
CPNE7-202ENST00000319518 PTF1AQ7RTS3 328 aa24.07■■□□□ 1.44
CPNE7-202ENST00000319518 MROH7-TTC4A0A0A0MT08 1334 aa24.07■■□□□ 1.44
CPNE7-202ENST00000319518 KIF23Q02241 960 aaPredicted RBP24.06■■□□□ 1.44
CPNE7-202ENST00000319518 BARGINQ6ZT62 677 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 KCND1Q9NSA2 647 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 BIN1O00499 593 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 GPAA1O43292 621 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 ZNF202O95125 648 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 UTP14CQ5TAP6 766 aaKnown RBP24.06■■□□□ 1.44
CPNE7-202ENST00000319518 AIFM3Q96NN9 605 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 BPIFA3Q9BQP9 254 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 XPO4Q9C0E2 1151 aaKnown RBP24.06■■□□□ 1.44
CPNE7-202ENST00000319518 SEC31BQ9NQW1 1179 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 C4AP0C0L4 1744 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 C4BP0C0L5 1744 aa24.06■■□□□ 1.44
CPNE7-202ENST00000319518 WDHD1O75717 1129 aaPredicted RBP24.05■■□□□ 1.44
CPNE7-202ENST00000319518 NCAPHQ15003 741 aa24.05■■□□□ 1.44
CPNE7-202ENST00000319518 BRAPQ7Z569 592 aa24.05■■□□□ 1.44
CPNE7-202ENST00000319518 NCOA7Q8NI08 942 aa24.05■■□□□ 1.44
CPNE7-202ENST00000319518 ZNF215Q9UL58 517 aaPredicted RBP24.05■■□□□ 1.44
CPNE7-202ENST00000319518 ANO1Q5XXA6 986 aa24.04■■□□□ 1.44
CPNE7-202ENST00000319518 ARMCX5Q6P1M9 558 aa24.04■■□□□ 1.44
CPNE7-202ENST00000319518 DHX16O60231 1041 aaKnown RBP24.04■■□□□ 1.44
CPNE7-202ENST00000319518 PDE8BO95263 885 aa24.04■■□□□ 1.44
CPNE7-202ENST00000319518 PFKFB1P16118 471 aa24.04■■□□□ 1.44
CPNE7-202ENST00000319518 E4F1Q66K89 784 aaPredicted RBP24.04■■□□□ 1.44
CPNE7-202ENST00000319518 IFNKQ9P0W0 207 aa24.04■■□□□ 1.44
CPNE7-202ENST00000319518 LRRFIP1Q32MZ4 808 aaKnown RBP24.03■■□□□ 1.44
CPNE7-202ENST00000319518 NGLY1Q96IV0 654 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 NIP7Q9Y221 180 aaKnown RBP eCLIP24.03■■□□□ 1.44
CPNE7-202ENST00000319518 UBAP1LF5GYI3 381 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 ZNF213O14771 459 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 CPLX1O14810 134 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 SLC3A2P08195 630 aaKnown RBP24.03■■□□□ 1.44
CPNE7-202ENST00000319518 PHKA1P46020 1223 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 GSDMDP57764 484 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 FEZ1Q99689 392 aa24.03■■□□□ 1.44
CPNE7-202ENST00000319518 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
CPNE7-202ENST00000319518 MARCKSP29966 332 aaPredicted RBP24.02■■□□□ 1.44
CPNE7-202ENST00000319518 NLRP12P59046 1061 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 RALYLQ86SE5 291 aaKnown RBP24.02■■□□□ 1.44
CPNE7-202ENST00000319518 HSD3B7Q9H2F3 369 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 IMPACTQ9P2X3 320 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 MYH7P12883 1935 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 CMA1P23946 247 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 TBC1D10CQ8IV04 446 aa24.02■■□□□ 1.44
CPNE7-202ENST00000319518 AKAP11Q9UKA4 1901 aa24.01■■□□□ 1.43
CPNE7-202ENST00000319518 CYB5R4Q7L1T6 521 aa24.01■■□□□ 1.43
CPNE7-202ENST00000319518 SENP2Q9HC62 589 aa24.01■■□□□ 1.43
CPNE7-202ENST00000319518 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.01■■□□□ 1.43
CPNE7-202ENST00000319518 ZHX1Q9UKY1 873 aaPredicted RBP24.01■■□□□ 1.43
CPNE7-202ENST00000319518 V9GYY5 206 aaPredicted RBP24.01■■□□□ 1.43
CPNE7-202ENST00000319518 SMC2O95347 1197 aa24.01■■□□□ 1.43
CPNE7-202ENST00000319518 SYNE3Q6ZMZ3 975 aa24.01■■□□□ 1.43
CPNE7-202ENST00000319518 RXRAP19793 462 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 SLC39A14Q15043 492 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 FAM182BQ5T319 152 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 CCDC102BQ68D86 513 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 ISM2Q6H9L7 571 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 TMC6Q7Z403 805 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 LINC00116Q8NCU8 138 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 PIH1D3Q9NQM4 214 aaKnown RBP24■■□□□ 1.43
CPNE7-202ENST00000319518 CGNQ9P2M7 1197 aaKnown RBP24■■□□□ 1.43
CPNE7-202ENST00000319518 WDR19Q8NEZ3 1342 aa24■■□□□ 1.43
CPNE7-202ENST00000319518 ABCC12Q96J65 1359 aa23.99■■□□□ 1.43
CPNE7-202ENST00000319518 OGFRQ9NZT2 677 aa23.99■■□□□ 1.43
CPNE7-202ENST00000319518 NTSR2O95665 410 aa23.99■■□□□ 1.43
CPNE7-202ENST00000319518 ADD2P35612 726 aa23.99■■□□□ 1.43
CPNE7-202ENST00000319518 DDX41Q9UJV9 622 aaKnown RBP23.99■■□□□ 1.43
CPNE7-202ENST00000319518 ZMYM6O95789 1325 aa23.98■■□□□ 1.43
CPNE7-202ENST00000319518 ATP1A3P13637 1013 aa23.98■■□□□ 1.43
CPNE7-202ENST00000319518 CDC27P30260 824 aa23.98■■□□□ 1.43
CPNE7-202ENST00000319518 VPS37DQ86XT2 251 aa23.98■■□□□ 1.43
CPNE7-202ENST00000319518 ANGEL1Q9UNK9 670 aaKnown RBP23.98■■□□□ 1.43
CPNE7-202ENST00000319518 MYO5AQ9Y4I1 1855 aaKnown RBP23.98■■□□□ 1.43
CPNE7-202ENST00000319518 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms