RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 RTEL1Q9NZ71 1219 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 AFMP43652 599 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 PPP2R3AQ06190 1150 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 NR5A1Q13285 461 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 CC2D1AQ6P1N0 951 aaPredicted RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 TBC1D10CQ8IV04 446 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 CDC5LQ99459 802 aaKnown RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 VPS18Q9P253 973 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 TRIM10Q9UDY6 481 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 FEZ2Q9UHY8 353 aaPredicted RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 CTAGE5O15320 804 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 GSDMDP57764 484 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 GSPT2Q8IYD1 628 aaKnown RBP11.09□□□□□ -0.63
RPGR-201ENST00000318842 RGS22Q8NE09 1264 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 PNKPQ96T60 521 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 FAM89AQ96GI7 184 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 DIP2AQ14689 1571 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 ACRBPQ8NEB7 543 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 RIN2Q8WYP3 895 aaPredicted RBP11.08□□□□□ -0.64
RPGR-201ENST00000318842 NFE2L3Q9Y4A8 694 aa11.08□□□□□ -0.64
RPGR-201ENST00000318842 BAZ2BQ9UIF8 2168 aaKnown RBP11.08□□□□□ -0.64
RPGR-201ENST00000318842 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 NBPF26B4DH59 902 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 NEMFO60524 1076 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 CASQ1P31415 396 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 CCT6AP40227 531 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 KRT40Q6A162 431 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 NBPF10Q6P3W6 841 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 NBPF15Q8N660 670 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 CNNM3Q8NE01 707 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 COPRSQ9NQ92 184 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 POLR2DO15514 142 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 RANBP6O60518 1105 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 GPTP24298 496 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 FOXO4P98177 505 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 SLC26A6Q9BXS9 759 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 WNT7AO00755 349 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 SRRTQ9BXP5 876 aaKnown RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 SERTAD1Q9UHV2 236 aa11.07□□□□□ -0.64
RPGR-201ENST00000318842 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
RPGR-201ENST00000318842 FAM170AA1A519 330 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 ENC1O14682 589 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 MYL5Q02045 173 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 ZSCAN26Q16670 478 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 RAD9BQ6WBX8 426 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 JCADQ9P266 1359 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 ERCC3P19447 782 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 FAM193AP78312 1265 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
RPGR-201ENST00000318842 VSTM4Q8IW00 320 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 TC2NQ8N9U0 490 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 SIRT1Q96EB6 747 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 LAMA4Q16363 1823 aa11.06□□□□□ -0.64
RPGR-201ENST00000318842 PRDM1O75626 825 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 TTC19Q6DKK2 380 aaPredicted RBP11.05□□□□□ -0.64
RPGR-201ENST00000318842 NCAPH2Q6IBW4 605 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 HDAC6Q9UBN7 1215 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 ADAM21Q9UKJ8 722 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 TOPAZ1Q8N9V7 1692 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 GPAA1O43292 621 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 SRGAP2O75044 1071 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 LONRF2Q1L5Z9 754 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 TTC39AQ5SRH9 613 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 FUT8Q9BYC5 575 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 PCDHB6Q9Y5E3 794 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
RPGR-201ENST00000318842 ZNF569Q5MCW4 686 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 ALDH8A1Q9H2A2 487 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms