RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
SYCN-201ENST00000318438 NEURL1BA8MQ27 555 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 H7C1W4 665 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 CYP2C8P10632 490 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 PPATQ06203 517 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 FAM205AQ6ZU69 1335 aa16.84■□□□□ 0.29
SYCN-201ENST00000318438 INPP5BP32019 993 aa16.83■□□□□ 0.28
SYCN-201ENST00000318438 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
SYCN-201ENST00000318438 TTC28Q96AY4 2481 aa16.83■□□□□ 0.28
SYCN-201ENST00000318438 PARK7Q99497 189 aaKnown RBP16.83■□□□□ 0.28
SYCN-201ENST00000318438 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
SYCN-201ENST00000318438 CSF1RP07333 972 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 CAPN2P17655 700 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 GRIK5Q16478 980 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 KCNH4Q9UQ05 1017 aa16.82■□□□□ 0.28
SYCN-201ENST00000318438 COL9A1P20849 921 aa16.81■□□□□ 0.28
SYCN-201ENST00000318438 GPAT2Q6NUI2 795 aa16.81■□□□□ 0.28
SYCN-201ENST00000318438 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.28
SYCN-201ENST00000318438 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
SYCN-201ENST00000318438 POTEB2H3BUK9 544 aa16.8■□□□□ 0.28
SYCN-201ENST00000318438 PLIN1O60240 522 aa16.8■□□□□ 0.28
SYCN-201ENST00000318438 CASP7P55210 303 aa16.8■□□□□ 0.28
SYCN-201ENST00000318438 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
SYCN-201ENST00000318438 C8orf58Q8NAV2 365 aa16.8■□□□□ 0.28
SYCN-201ENST00000318438 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
SYCN-201ENST00000318438 IRF5Q13568 498 aa16.79■□□□□ 0.28
SYCN-201ENST00000318438 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
SYCN-201ENST00000318438 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
SYCN-201ENST00000318438 ZNF341Q9BYN7 854 aa16.79■□□□□ 0.28
SYCN-201ENST00000318438 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
SYCN-201ENST00000318438 RAPGEFL1Q9UHV5 662 aa16.79■□□□□ 0.28
SYCN-201ENST00000318438 MGAMO43451 1857 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 CDH23Q9H251 3354 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 GYG1P46976 350 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 GNAI1P63096 354 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 GCKRQ14397 625 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
SYCN-201ENST00000318438 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 C11orf49Q9H6J7 331 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 A0A1B0GUL6 1792 aa16.78■□□□□ 0.28
SYCN-201ENST00000318438 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
SYCN-201ENST00000318438 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
SYCN-201ENST00000318438 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
SYCN-201ENST00000318438 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
SYCN-201ENST00000318438 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
SYCN-201ENST00000318438 MAFAQ8NHW3 353 aaPredicted RBP16.76■□□□□ 0.27
SYCN-201ENST00000318438 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
SYCN-201ENST00000318438 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
SYCN-201ENST00000318438 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
SYCN-201ENST00000318438 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
SYCN-201ENST00000318438 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
SYCN-201ENST00000318438 DNAH12Q6ZR08 3092 aa16.74■□□□□ 0.27
SYCN-201ENST00000318438 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 TRIM32Q13049 653 aa16.74■□□□□ 0.27
SYCN-201ENST00000318438 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 G2E3Q7L622 706 aa16.74■□□□□ 0.27
SYCN-201ENST00000318438 FAM84BQ96KN1 310 aaPredicted RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
SYCN-201ENST00000318438 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
SYCN-201ENST00000318438 IQSEC3Q9UPP2 1182 aaPredicted RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
SYCN-201ENST00000318438 PFASO15067 1338 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 FOXO4P98177 505 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 HDLBPQ00341 1268 aaKnown RBP16.73■□□□□ 0.27
SYCN-201ENST00000318438 ZNF697Q5TEC3 545 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
SYCN-201ENST00000318438 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 COA7Q96BR5 231 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 ZDHHC15Q96MV8 337 aa16.73■□□□□ 0.27
SYCN-201ENST00000318438 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
SYCN-201ENST00000318438 CXCL11O14625 94 aa16.72■□□□□ 0.27
SYCN-201ENST00000318438 HMGCRP04035 888 aa16.72■□□□□ 0.27
SYCN-201ENST00000318438 NOL9Q5SY16 702 aaKnown RBP16.72■□□□□ 0.27
SYCN-201ENST00000318438 LDHAL6AQ6ZMR3 332 aa16.72■□□□□ 0.27
SYCN-201ENST00000318438 GADL1Q6ZQY3 521 aa16.72■□□□□ 0.27
SYCN-201ENST00000318438 WWC1Q8IX03 1113 aa16.72■□□□□ 0.27
SYCN-201ENST00000318438 SMCR8Q8TEV9 937 aaPredicted RBP16.72■□□□□ 0.27
SYCN-201ENST00000318438 A0A0G2JLL6 359 aaPredicted RBP16.71■□□□□ 0.27
SYCN-201ENST00000318438 PRRT2Q7Z6L0 340 aaPredicted RBP16.71■□□□□ 0.27
SYCN-201ENST00000318438 HMX1Q9NP08 348 aaPredicted RBP16.71■□□□□ 0.27
SYCN-201ENST00000318438 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
SYCN-201ENST00000318438 OGDHLQ9ULD0 1010 aa16.71■□□□□ 0.27
SYCN-201ENST00000318438 TCP10Q12799 353 aa16.7■□□□□ 0.26
SYCN-201ENST00000318438 TAF7LQ5H9L4 462 aa16.7■□□□□ 0.26
SYCN-201ENST00000318438 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
SYCN-201ENST00000318438 ANKRD13CQ8N6S4 541 aa16.7■□□□□ 0.26
SYCN-201ENST00000318438 SYMPKQ92797 1274 aaKnown RBP16.7■□□□□ 0.26
SYCN-201ENST00000318438 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
SYCN-201ENST00000318438 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms