RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 FXR1P51114 621 aaKnown RBP eCLIP10.16□□□□□ -0.78
TPM3-203ENST00000312970 MAP3K9P80192 1104 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 FBXO46Q6PJ61 603 aaPredicted RBP10.16□□□□□ -0.78
TPM3-203ENST00000312970 HHIPL2Q6UWX4 724 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 ATG9AQ7Z3C6 839 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 WDR66Q8TBY9 1149 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 TMEM39BQ9GZU3 492 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
TPM3-203ENST00000312970 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
TPM3-203ENST00000312970 IGF2BP3O00425 579 aaKnown RBP eCLIP10.15□□□□□ -0.781e-7■■■■□ 23.3
TPM3-203ENST00000312970 CIAO1O76071 339 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 GJA5P36382 358 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 FKBP1CQ5VVH2 108 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 APOBEC3HQ6NTF7 200 aaKnown RBP10.15□□□□□ -0.78
TPM3-203ENST00000312970 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.15□□□□□ -0.78
TPM3-203ENST00000312970 FAM83AQ86UY5 434 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 OPTNQ96CV9 577 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 HOOK2Q96ED9 719 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 SIL1Q9H173 461 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 ELP3Q9H9T3 547 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 GNL3LQ9NVN8 582 aaKnown RBP10.15□□□□□ -0.78
TPM3-203ENST00000312970 TMOD2Q9NZR1 351 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 OTOFQ9HC10 1997 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 ARAP2Q8WZ64 1704 aa10.15□□□□□ -0.78
TPM3-203ENST00000312970 RBBP6Q7Z6E9 1792 aaKnown RBP10.14□□□□□ -0.79
TPM3-203ENST00000312970 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 RARSP54136 660 aaKnown RBP10.14□□□□□ -0.79
TPM3-203ENST00000312970 CACNB3P54284 484 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 ARHGAP45Q92619 1136 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 PTPN18Q99952 460 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 CSADQ9Y600 493 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 CUL9Q8IWT3 2517 aa10.14□□□□□ -0.79
TPM3-203ENST00000312970 IL15P40933 162 aaPredicted RBP10.13□□□□□ -0.79
TPM3-203ENST00000312970 GTF2A2P52657 109 aa10.13□□□□□ -0.79
TPM3-203ENST00000312970 VGLL4Q14135 290 aa10.13□□□□□ -0.79
TPM3-203ENST00000312970 ATP2B3Q16720 1220 aa10.13□□□□□ -0.79
TPM3-203ENST00000312970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM3-203ENST00000312970 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
TPM3-203ENST00000312970 ERO1AQ96HE7 468 aa10.13□□□□□ -0.79
TPM3-203ENST00000312970 LRRFIP2Q9Y608 721 aaKnown RBP10.13□□□□□ -0.79
TPM3-203ENST00000312970 STK25O00506 426 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 SEMA3EO15041 775 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 IPO8O15397 1037 aaKnown RBP10.12□□□□□ -0.79
TPM3-203ENST00000312970 GNAI3P08754 354 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 SP3Q02447 781 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 CRHR2Q13324 411 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 DCAF15Q66K64 600 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 INTS3Q68E01 1043 aaKnown RBP10.12□□□□□ -0.79
TPM3-203ENST00000312970 COPRSQ9NQ92 184 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 RYDENQ9NUL5 291 aaKnown RBP10.12□□□□□ -0.79
TPM3-203ENST00000312970 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 DENND2AQ9ULE3 1009 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 TRIM17Q9Y577 477 aa10.12□□□□□ -0.79
TPM3-203ENST00000312970 CCL15-CCL14A0A0B4J2E2 113 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 SPDYE5A6NIY4 337 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 LDHBP07195 334 aaKnown RBP10.11□□□□□ -0.79
TPM3-203ENST00000312970 CCL15Q16663 113 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 OTOP1Q7RTM1 612 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 ERO1BQ86YB8 467 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 FAM151AQ8WW52 585 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 BRI3BPQ8WY22 251 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 ZKSCAN4Q969J2 545 aaPredicted RBP10.11□□□□□ -0.79
TPM3-203ENST00000312970 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 WRNIP1Q96S55 665 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 MEIS3Q99687 375 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 ZFYVE28Q9HCC9 887 aa10.11□□□□□ -0.79
TPM3-203ENST00000312970 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
TPM3-203ENST00000312970 SALL1Q9NSC2 1324 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
TPM3-203ENST00000312970 WDHD1O75717 1129 aaPredicted RBP10.1□□□□□ -0.79
TPM3-203ENST00000312970 CETPP11597 493 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 PRDX5P30044 214 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 PHKA1P46020 1223 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 TIMM10P62072 90 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 TCP10Q12799 353 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 GSE1Q14687 1217 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 ARHGEF6Q15052 776 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 TAF1CQ15572 869 aaPredicted RBP10.1□□□□□ -0.79
TPM3-203ENST00000312970 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 MIGA2Q7L4E1 593 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
TPM3-203ENST00000312970 CD99L2Q8TCZ2 262 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 ZNF341Q9BYN7 854 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 USP40Q9NVE5 1235 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
TPM3-203ENST00000312970 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 PTPN22Q9Y2R2 807 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 DAGLAQ9Y4D2 1042 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 SNCAIPQ9Y6H5 919 aa10.1□□□□□ -0.79
TPM3-203ENST00000312970 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 EN2P19622 333 aaPredicted RBP10.09□□□□□ -0.79
TPM3-203ENST00000312970 PPATQ06203 517 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 CCDC102BQ68D86 513 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 FAM43AQ8N2R8 423 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms