RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DCAF5Q96JK2 942 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 ATG3Q9NT62 314 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 SPECC1Q5M775 1068 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 BAG1Q99933 345 aaPredicted RBP9.93□□□□□ -0.82
COL6A5-202ENST00000312481 BPIFA3Q9BQP9 254 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 KDM6BO15054 1643 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 KIF3CO14782 793 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 SEMA3EO15041 775 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 ANKRD2Q9GZV1 360 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 PRDM11Q9NQV5 511 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 SAMD15Q9P1V8 674 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 IKBKBO14920 756 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 AKR1B10O60218 316 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 ANGEL1Q9UNK9 670 aaKnown RBP9.93□□□□□ -0.82
COL6A5-202ENST00000312481 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 MYH1P12882 1939 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 MYH4Q9Y623 1939 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 SPEF2Q9C093 1822 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 JADE2Q9NQC1 790 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 RPS6KB1P23443 525 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 C20orf194Q5TEA3 1177 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 OTUD6BQ8N6M0 293 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 GDAP1L1Q96MZ0 367 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 NAPGQ99747 312 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 MNAT1P51948 309 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 LACTBP83111 547 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 ZFYVE27Q5T4F4 411 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 HAUS3Q68CZ6 603 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 KDRP35968 1356 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC151A5D8V7 595 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 KRT2P35908 639 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 MAATS1Q7Z4T9 603 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PAG1Q9NWQ8 432 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 UBL4BQ8N7F7 174 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 ARID3AQ99856 593 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 TBX22Q9Y458 520 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 SEPT2Q15019 361 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PARP10Q53GL7 1025 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 MAST3O60307 1309 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PCDH11XQ9BZA7 1347 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PCDH11YQ9BZA8 1340 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 IGHDP01880 384 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 ERCC5P28715 1186 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-202ENST00000312481 PAK2Q13177 524 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 RPAINQ86UA6 219 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 FAM71BQ8TC56 605 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 CAPN2P17655 700 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 MKNK2Q9HBH9 465 aa9.92□□□□□ -0.82
COL6A5-202ENST00000312481 HSPA6P17066 643 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 SARNPP82979 210 aaKnown RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 XPCQ01831 940 aaPredicted RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 MAP7Q14244 749 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 CREB3L3Q68CJ9 461 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 KIFAP3Q92845 792 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 MRGBPQ9NV56 204 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 TBCAO75347 108 aaKnown RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 MIS12Q9H081 205 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 DDX21Q9NR30 783 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 ANKRD12Q6UB98 2062 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 TSNARE1Q96NA8 513 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 GSTTP1A0A1W2PQM5 241 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 FLOT1O75955 427 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 KAT14Q9H8E8 782 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 THAP12O43422 761 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 DZIP1Q86YF9 867 aaKnown RBP9.91□□□□□ -0.82
COL6A5-202ENST00000312481 AFAP1L1Q8TED9 768 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 ZNF75DP51815 510 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 TSNAXIP1Q2TAA8 658 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 DACT1Q9NYF0 836 aa9.91□□□□□ -0.82
COL6A5-202ENST00000312481 H0YCG3 227 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
COL6A5-202ENST00000312481 LMAN1P49257 510 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 CFAP221Q4G0U5 840 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 PHLDB2Q86SQ0 1253 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 NEK11Q8NG66 645 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 NT5C3AQ9H0P0 336 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 SIL1Q9H173 461 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms