RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 METAP2P50579 478 aaKnown RBP eCLIP26.78■■□□□ 1.88
CTSF-201ENST00000310325 MAP3K11Q16584 847 aa26.78■■□□□ 1.88
CTSF-201ENST00000310325 IGDCC4Q8TDY8 1250 aa26.78■■□□□ 1.88
CTSF-201ENST00000310325 FAM84BQ96KN1 310 aaPredicted RBP26.78■■□□□ 1.88
CTSF-201ENST00000310325 RAI14Q9P0K7 980 aa26.78■■□□□ 1.88
CTSF-201ENST00000310325 ILDR1Q86SU0 546 aaPredicted RBP26.78■■□□□ 1.88
CTSF-201ENST00000310325 KRT23Q9C075 422 aa26.78■■□□□ 1.88
CTSF-201ENST00000310325 CEBPZQ03701 1054 aaKnown RBP26.77■■□□□ 1.88
CTSF-201ENST00000310325 MFSD6Q6ZSS7 791 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 SGMS1Q86VZ5 419 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 STAG1Q8WVM7 1258 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 LY9Q9HBG7 655 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 CCDC192P0DO97 292 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 TMEM67Q5HYA8 995 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 ADGRA1Q86SQ6 560 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 FBXO18Q8NFZ0 1043 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 USP28Q96RU2 1077 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 INCENPQ9NQS7 918 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 TACC3Q9Y6A5 838 aa26.77■■□□□ 1.88
CTSF-201ENST00000310325 KDM4AO75164 1064 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 LIFRP42702 1097 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 RGS22Q8NE09 1264 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 ANKRD2Q9GZV1 360 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 TNMDQ9H2S6 317 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 ZSWIM5Q9P217 1185 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 TNRC6CQ9HCJ0 1690 aaKnown RBP26.76■■□□□ 1.87
CTSF-201ENST00000310325 AFF2P51816 1311 aa26.76■■□□□ 1.87
CTSF-201ENST00000310325 ECM29Q5VYK3 1845 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 SEMA3EO15041 775 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 CDKL5O76039 1030 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 FBXO33Q7Z6M2 555 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 FTOQ9C0B1 505 aaKnown RBP eCLIP26.75■■□□□ 1.87
CTSF-201ENST00000310325 CLSTN2Q9H4D0 955 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 SENP2Q9HC62 589 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 MAGEB6P1A0A0J9YX57 407 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 NFXL1Q6ZNB6 911 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 ZSCAN30Q86W11 494 aa26.75■■□□□ 1.87
CTSF-201ENST00000310325 ZBTB43O43298 467 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 NR1I2O75469 434 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 RFC4P35249 363 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 CAMK4Q16566 473 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 OTUD7BQ6GQQ9 843 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 CCDC24Q8N4L8 307 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 CERKQ8TCT0 537 aa26.74■■□□□ 1.87
CTSF-201ENST00000310325 IFIT3O14879 490 aaKnown RBP26.73■■□□□ 1.87
CTSF-201ENST00000310325 CPLX2Q6PUV4 134 aaKnown RBP26.73■■□□□ 1.87
CTSF-201ENST00000310325 RBM43Q6ZSC3 357 aaKnown RBP26.73■■□□□ 1.87
CTSF-201ENST00000310325 ONECUT3O60422 494 aaPredicted RBP26.73■■□□□ 1.87
CTSF-201ENST00000310325 TRAPPC3LQ5T215 181 aa26.73■■□□□ 1.87
CTSF-201ENST00000310325 MICU3Q86XE3 530 aa26.73■■□□□ 1.87
CTSF-201ENST00000310325 PDS5AQ29RF7 1337 aaKnown RBP26.72■■□□□ 1.87
CTSF-201ENST00000310325 RXRAP19793 462 aa26.72■■□□□ 1.87
CTSF-201ENST00000310325 RNF41Q9H4P4 317 aaPredicted RBP26.72■■□□□ 1.87
CTSF-201ENST00000310325 GOLGA8AA7E2F4 631 aa26.72■■□□□ 1.87
CTSF-201ENST00000310325 KLRK1P26718 216 aa26.72■■□□□ 1.87
CTSF-201ENST00000310325 CDC27P30260 824 aa26.72■■□□□ 1.87
CTSF-201ENST00000310325 BRAPQ7Z569 592 aa26.72■■□□□ 1.87
CTSF-201ENST00000310325 RIOK1Q9BRS2 568 aaKnown RBP26.72■■□□□ 1.87
CTSF-201ENST00000310325 TM4SF1P30408 202 aa26.71■■□□□ 1.87
CTSF-201ENST00000310325 PPARAQ07869 468 aa26.71■■□□□ 1.87
CTSF-201ENST00000310325 MTA3Q9BTC8 594 aa26.71■■□□□ 1.87
CTSF-201ENST00000310325 CCDC69A6NI79 296 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 NPHP1O15259 732 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 RRP12Q5JTH9 1297 aaKnown RBP26.7■■□□□ 1.87
CTSF-201ENST00000310325 FAM196AQ6ZSG2 479 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 SEPT12Q8IYM1 358 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 SDR42E1Q8WUS8 393 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 TOMM22Q9NS69 142 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 RTEL1Q9NZ71 1219 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 SLC12A7Q9Y666 1083 aa26.7■■□□□ 1.87
CTSF-201ENST00000310325 NID2Q14112 1375 aa26.7■■□□□ 1.86
CTSF-201ENST00000310325 MAST2Q6P0Q8 1798 aa26.7■■□□□ 1.86
CTSF-201ENST00000310325 TYRO3Q06418 890 aa26.7■■□□□ 1.86
CTSF-201ENST00000310325 SART3Q15020 963 aaKnown RBP26.7■■□□□ 1.86
CTSF-201ENST00000310325 ANAPC4Q9UJX5 808 aa26.7■■□□□ 1.86
CTSF-201ENST00000310325 HIBADHP31937 336 aaKnown RBP26.69■■□□□ 1.86
CTSF-201ENST00000310325 CKAP2LQ8IYA6 745 aa26.69■■□□□ 1.86
CTSF-201ENST00000310325 ALG1Q9BT22 464 aa26.69■■□□□ 1.86
CTSF-201ENST00000310325 CCDC39Q9UFE4 941 aa26.69■■□□□ 1.86
CTSF-201ENST00000310325 USP25Q9UHP3 1055 aa26.69■■□□□ 1.86
CTSF-201ENST00000310325 TRPC5Q9UL62 973 aaPredicted RBP26.69■■□□□ 1.86
CTSF-201ENST00000310325 KIF23Q02241 960 aaPredicted RBP26.68■■□□□ 1.86
CTSF-201ENST00000310325 NTRK3Q16288 839 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 CCAR1Q8IX12 1150 aaKnown RBP26.68■■□□□ 1.86
CTSF-201ENST00000310325 CCDC144CPQ8IYA2 1237 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 GJB4Q9NTQ9 266 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 BAZ2AQ9UIF9 1905 aaKnown RBP26.68■■□□□ 1.86
CTSF-201ENST00000310325 SYNE3Q6ZMZ3 975 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 ZNF384Q8TF68 577 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 MYL10Q9BUA6 226 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 BCL11BQ9C0K0 894 aaPredicted RBP26.68■■□□□ 1.86
CTSF-201ENST00000310325 FAM217BQ9NTX9 383 aaPredicted RBP26.68■■□□□ 1.86
CTSF-201ENST00000310325 MRVI1Q9Y6F6 885 aa26.68■■□□□ 1.86
CTSF-201ENST00000310325 CCDC88AQ3V6T2 1871 aa26.67■■□□□ 1.86
CTSF-201ENST00000310325 UBR3Q6ZT12 1888 aa26.67■■□□□ 1.86
CTSF-201ENST00000310325 MYSM1Q5VVJ2 828 aa26.67■■□□□ 1.86
CTSF-201ENST00000310325 TFCP2L1Q9NZI6 479 aa26.67■■□□□ 1.86
CTSF-201ENST00000310325 NOL7Q9UMY1 257 aaKnown RBP26.67■■□□□ 1.86
CTSF-201ENST00000310325 POLR3DP05423 398 aaPredicted RBP26.66■■□□□ 1.86
CTSF-201ENST00000310325 MSNP26038 577 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms