RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 MICU3Q86XE3 530 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
XCR1-201ENST00000309285 PXDNQ92626 1479 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 CCDC152Q4G0S7 254 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 SCLT1Q96NL6 688 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 UQCRFS1P1P0C7P4 283 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 ZAP70P43403 619 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 KNDC1Q76NI1 1749 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 ZNF445P59923 1031 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 H7C1W4 665 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 JAK2O60674 1132 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 LARGE1O95461 756 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 NECTIN1Q15223 517 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 CCDC96Q2M329 555 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 DACT1Q9NYF0 836 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 DLG5Q8TDM6 1919 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 PRC1O43663 620 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 ZBTB38Q8NAP3 1195 aaPredicted RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 C8orf37Q96NL8 207 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 CDC5LQ99459 802 aaKnown RBP10.57□□□□□ -0.72
XCR1-201ENST00000309285 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
XCR1-201ENST00000309285 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 IFIT3O14879 490 aaKnown RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 NEK11Q8NG66 645 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 KAZALD1Q96I82 304 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 ANO6Q4KMQ2 910 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 SYT10Q6XYQ8 523 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 CDC37L1Q7L3B6 337 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 OTUD6BQ8N6M0 293 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 CPLX3Q8WVH0 158 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 PTPDC1A2A3K4 754 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 PDE8AO60658 829 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 PCCAP05165 728 aaPredicted RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 ADORA1P30542 326 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 KIAA1328Q86T90 577 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 RPGRQ92834 1020 aaKnown RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 ZDHHC9Q9Y397 364 aa10.56□□□□□ -0.72
XCR1-201ENST00000309285 ZNF444Q8N0Y2 327 aaPredicted RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
XCR1-201ENST00000309285 CYP21A2P08686 494 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 MAP2K1Q02750 393 aaPredicted RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 FAM114A1Q8IWE2 563 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 GREM2Q9H772 168 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 LUC7LQ9NQ29 371 aaKnown RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 SEC63Q9UGP8 760 aaKnown RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 BIN1O00499 593 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 ZBTB22O15209 634 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 GPAA1O43292 621 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 SLFNL1Q499Z3 407 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 ERO1AQ96HE7 468 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 DACH1Q9UI36 760 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 AKAP12Q02952 1782 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 NEBLO76041 1014 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 TMEM67Q5HYA8 995 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 NBPF11Q86T75 865 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 CTCFLQ8NI51 663 aaPredicted RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 APPBP2Q92624 585 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 VAT1LQ9HCJ6 419 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
XCR1-201ENST00000309285 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 SLC12A7Q9Y666 1083 aa10.55□□□□□ -0.72
XCR1-201ENST00000309285 PEAK1Q9H792 1746 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 TOM1O60784 492 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 MCM3P25205 808 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
XCR1-201ENST00000309285 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
XCR1-201ENST00000309285 CTSWP56202 376 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 LRCH2Q5VUJ6 765 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 PI16Q6UXB8 463 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 FSIP1Q8NA03 581 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 ZNF622Q969S3 477 aaKnown RBP eCLIP10.54□□□□□ -0.72
XCR1-201ENST00000309285 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 RXRAP19793 462 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 DDIT3P35638 169 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 MAGEB6Q8N7X4 407 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
XCR1-201ENST00000309285 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms