RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 AOC3Q16853 763 aa20.79■□□□□ 0.92
KRT28-201ENST00000306658 ZSCAN31Q96LW9 406 aaPredicted RBP20.79■□□□□ 0.92
KRT28-201ENST00000306658 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 ECE2O60344 883 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 PPP4CP60510 307 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 TRDNQ13061 729 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 DIXDC1Q155Q3 683 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 NCOA7Q8NI08 942 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 SDR42E1Q8WUS8 393 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 FAM163AQ96GL9 167 aaPredicted RBP20.78■□□□□ 0.92
KRT28-201ENST00000306658 VPS33BQ9H267 617 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
KRT28-201ENST00000306658 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
KRT28-201ENST00000306658 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
KRT28-201ENST00000306658 KLHL34Q8N239 644 aa20.77■□□□□ 0.92
KRT28-201ENST00000306658 ATP8A2Q9NTI2 1148 aa20.77■□□□□ 0.92
KRT28-201ENST00000306658 MYH2Q9UKX2 1941 aa20.77■□□□□ 0.92
KRT28-201ENST00000306658 FKBP1AP62942 108 aaKnown RBP20.77■□□□□ 0.91
KRT28-201ENST00000306658 SH2B1Q9NRF2 756 aaPredicted RBP20.77■□□□□ 0.91
KRT28-201ENST00000306658 FGD1P98174 961 aa20.76■□□□□ 0.91
KRT28-201ENST00000306658 CUL4AQ13619 759 aa20.76■□□□□ 0.91
KRT28-201ENST00000306658 INTS4Q96HW7 963 aaKnown RBP20.76■□□□□ 0.91
KRT28-201ENST00000306658 FOXD4L1Q9NU39 408 aa20.76■□□□□ 0.91
KRT28-201ENST00000306658 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
KRT28-201ENST00000306658 GPR75-ASB3A0A0A6YYF3 556 aa20.75■□□□□ 0.91
KRT28-201ENST00000306658 PLCG2P16885 1265 aa20.75■□□□□ 0.91
KRT28-201ENST00000306658 MCM5P33992 734 aa20.75■□□□□ 0.91
KRT28-201ENST00000306658 EXOSC10Q01780 885 aaKnown RBP20.75■□□□□ 0.91
KRT28-201ENST00000306658 COL9A3Q14050 684 aaPredicted RBP20.75■□□□□ 0.91
KRT28-201ENST00000306658 TCEANC2Q96MN5 208 aa20.75■□□□□ 0.91
KRT28-201ENST00000306658 CWC22Q9HCG8 908 aaKnown RBP20.75■□□□□ 0.91
KRT28-201ENST00000306658 USP17L3A6NCW0 530 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 USP17L4A6NCW7 530 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 Q6ZUG5 572 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 USP17L1Q7RTZ2 530 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 CERS5Q8N5B7 392 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 NBPF3Q9H094 633 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 CNNM2Q9H8M5 875 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 SPON1Q9HCB6 807 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 CHMP5Q9NZZ3 219 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 GAKO14976 1311 aa20.74■□□□□ 0.91
KRT28-201ENST00000306658 BTDP43251 543 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 PPARAQ07869 468 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 AKNAD1Q5T1N1 836 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 MFSD6Q6ZSS7 791 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 TBC1D10CQ8IV04 446 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 ANAPC4Q9UJX5 808 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 CIZ1Q9ULV3 898 aaPredicted RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 TTF2Q9UNY4 1162 aaKnown RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 WDR19Q8NEZ3 1342 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 USP5P45974 858 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 CTDSPL2Q05D32 466 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 MB21D2Q8IYB1 491 aaPredicted RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
KRT28-201ENST00000306658 KCNQ5Q9NR82 932 aa20.73■□□□□ 0.91
KRT28-201ENST00000306658 BRCA1P38398 1863 aaKnown RBP20.72■□□□□ 0.91
KRT28-201ENST00000306658 MINDY4BA8MYZ0 360 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 DDIT3P35638 169 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 DACT2Q5SW24 774 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 FBXL16Q8N461 479 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 SH3RF3Q8TEJ3 882 aaPredicted RBP20.72■□□□□ 0.91
KRT28-201ENST00000306658 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 KRT23Q9C075 422 aa20.72■□□□□ 0.91
KRT28-201ENST00000306658 F8W031 263 aaPredicted RBP20.71■□□□□ 0.91
KRT28-201ENST00000306658 CTR9Q6PD62 1173 aa20.71■□□□□ 0.91
KRT28-201ENST00000306658 AGXT2Q9BYV1 514 aa20.71■□□□□ 0.91
KRT28-201ENST00000306658 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
KRT28-201ENST00000306658 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
KRT28-201ENST00000306658 TPCN1Q9ULQ1 816 aa20.71■□□□□ 0.91
KRT28-201ENST00000306658 USP17L12C9JPN9 530 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 USP17L21D6R901 530 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 PRC1O43663 620 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 SBK1Q52WX2 424 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 HHIPL2Q6UWX4 724 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 BRF1Q92994 677 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 MXD3Q9BW11 206 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 MRIQ9BWK5 157 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 DAGLAQ9Y4D2 1042 aa20.7■□□□□ 0.91
KRT28-201ENST00000306658 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.7■□□□□ 0.91
KRT28-201ENST00000306658 SCN9AQ15858 1988 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.9
KRT28-201ENST00000306658 ME3Q16798 604 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 AMOTL1Q8IY63 956 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 TEKT1Q969V4 418 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 BCS1LQ9Y276 419 aa20.7■□□□□ 0.9
KRT28-201ENST00000306658 BAZ2AQ9UIF9 1905 aaKnown RBP20.7■□□□□ 0.9
KRT28-201ENST00000306658 SLC3A2P08195 630 aaKnown RBP20.69■□□□□ 0.9
KRT28-201ENST00000306658 CHST3Q7LGC8 479 aa20.69■□□□□ 0.9
KRT28-201ENST00000306658 TEX11Q8IYF3 940 aa20.69■□□□□ 0.9
KRT28-201ENST00000306658 MCM9Q9NXL9 1143 aa20.69■□□□□ 0.9
KRT28-201ENST00000306658 TIAM2Q8IVF5 1701 aa20.69■□□□□ 0.9
KRT28-201ENST00000306658 NEDD4P46934 1319 aa20.68■□□□□ 0.9
KRT28-201ENST00000306658 YDJCA8MPS7 323 aa20.68■□□□□ 0.9
KRT28-201ENST00000306658 B4E1Z4 1266 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms