RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TNNQ9UQP3 1299 aa25.49■■□□□ 1.67
RER1-201ENST00000306256 SPDYE5A6NIY4 337 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 GTF2A2P52657 109 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 TCP10Q12799 353 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 MIGA2Q7L4E1 593 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 ERO1AQ96HE7 468 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 DENND2AQ9ULE3 1009 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 DOCK2Q92608 1830 aa25.48■■□□□ 1.67
RER1-201ENST00000306256 CAP1Q01518 475 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 NFIAQ12857 509 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 TAF1CQ15572 869 aaPredicted RBP25.47■■□□□ 1.67
RER1-201ENST00000306256 DCAF15Q66K64 600 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 CCDC102BQ68D86 513 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 FAM43AQ8N2R8 423 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 HOOK2Q96ED9 719 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 ZSWIM8A7E2V4 1837 aa25.47■■□□□ 1.67
RER1-201ENST00000306256 SALL1Q9NSC2 1324 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 SEMA3EO15041 775 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 SRGAP3O43295 1099 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 GNAI3P08754 354 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 ERO1BQ86YB8 467 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 FAM151AQ8WW52 585 aa25.46■■□□□ 1.67
RER1-201ENST00000306256 TRIM27P14373 513 aa25.45■■□□□ 1.66
RER1-201ENST00000306256 INPP5BP32019 993 aa25.45■■□□□ 1.66
RER1-201ENST00000306256 TIMM10P62072 90 aa25.45■■□□□ 1.66
RER1-201ENST00000306256 SP3Q02447 781 aa25.45■■□□□ 1.66
RER1-201ENST00000306256 ZNF341Q9BYN7 854 aa25.45■■□□□ 1.66
RER1-201ENST00000306256 BCAR3O75815 825 aa25.44■■□□□ 1.66
RER1-201ENST00000306256 TFCP2Q12800 502 aa25.44■■□□□ 1.66
RER1-201ENST00000306256 RASGRF1Q13972 1273 aa25.44■■□□□ 1.66
RER1-201ENST00000306256 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
RER1-201ENST00000306256 USP40Q9NVE5 1235 aa25.44■■□□□ 1.66
RER1-201ENST00000306256 IRF6O14896 467 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 CLUAP1Q96AJ1 413 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 EFCC1Q9HA90 598 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 ZFYVE28Q9HCC9 887 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 FAM198AQ9UFP1 575 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 PTPN22Q9Y2R2 807 aa25.43■■□□□ 1.66
RER1-201ENST00000306256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.43■■□□□ 1.66
RER1-201ENST00000306256 HTTP42858 3142 aa25.42■■□□□ 1.66
RER1-201ENST00000306256 A0A1B0GUL7 405 aa25.42■■□□□ 1.66
RER1-201ENST00000306256 IPO8O15397 1037 aaKnown RBP25.42■■□□□ 1.66
RER1-201ENST00000306256 CETPP11597 493 aa25.42■■□□□ 1.66
RER1-201ENST00000306256 MTX1Q13505 466 aa25.42■■□□□ 1.66
RER1-201ENST00000306256 PPIL2Q13356 520 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 SNAPC2Q13487 334 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 ATF7IPQ6VMQ6 1270 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 ZFPM1Q8IX07 1006 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 XAGE2Q96GT9 111 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 ABCF2Q9UG63 623 aa25.41■■□□□ 1.66
RER1-201ENST00000306256 RBBP6Q7Z6E9 1792 aaKnown RBP25.41■■□□□ 1.66
RER1-201ENST00000306256 BTBD19C9JJ37 291 aa25.4■■□□□ 1.66
RER1-201ENST00000306256 DZIP1Q86YF9 867 aaKnown RBP25.4■■□□□ 1.66
RER1-201ENST00000306256 ZGPATQ8N5A5 531 aaKnown RBP25.4■■□□□ 1.66
RER1-201ENST00000306256 AKAP2Q9Y2D5 859 aa25.39■■□□□ 1.66
RER1-201ENST00000306256 GAKO14976 1311 aa25.38■■□□□ 1.65
RER1-201ENST00000306256 ZBTB22O15209 634 aa25.38■■□□□ 1.65
RER1-201ENST00000306256 GNAI2P04899 355 aa25.38■■□□□ 1.65
RER1-201ENST00000306256 RGS3P49796 1198 aa25.38■■□□□ 1.65
RER1-201ENST00000306256 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.38■■□□□ 1.65
RER1-201ENST00000306256 ZNF112Q9UJU3 913 aa25.38■■□□□ 1.65
RER1-201ENST00000306256 RFX7Q2KHR2 1363 aa25.37■■□□□ 1.65
RER1-201ENST00000306256 PNMA6EA0A0J9YXQ4 647 aa25.37■■□□□ 1.65
RER1-201ENST00000306256 PPATQ06203 517 aa25.37■■□□□ 1.65
RER1-201ENST00000306256 MVPQ14764 893 aaKnown RBP25.37■■□□□ 1.65
RER1-201ENST00000306256 NEUROD6Q96NK8 337 aa25.37■■□□□ 1.65
RER1-201ENST00000306256 PDS5AQ29RF7 1337 aaKnown RBP25.37■■□□□ 1.65
RER1-201ENST00000306256 PTPRFP10586 1907 aa25.36■■□□□ 1.65
RER1-201ENST00000306256 POTEFA5A3E0 1075 aa25.36■■□□□ 1.65
RER1-201ENST00000306256 ATRNL1Q5VV63 1379 aa25.35■■□□□ 1.65
RER1-201ENST00000306256 DOCK1Q14185 1865 aa25.35■■□□□ 1.65
RER1-201ENST00000306256 TLR2O60603 784 aa25.35■■□□□ 1.65
RER1-201ENST00000306256 WDHD1O75717 1129 aaPredicted RBP25.35■■□□□ 1.65
RER1-201ENST00000306256 PI16Q6UXB8 463 aa25.35■■□□□ 1.65
RER1-201ENST00000306256 TMEM57Q8N5G2 664 aa25.35■■□□□ 1.65
RER1-201ENST00000306256 ZCCHC17Q9NP64 241 aaKnown RBP25.35■■□□□ 1.65
RER1-201ENST00000306256 BTDP43251 543 aa25.34■■□□□ 1.65
RER1-201ENST00000306256 NOL9Q5SY16 702 aaKnown RBP25.34■■□□□ 1.65
RER1-201ENST00000306256 SPTY2D1Q68D10 685 aaPredicted RBP25.34■■□□□ 1.65
RER1-201ENST00000306256 ARMC5Q96C12 935 aa25.34■■□□□ 1.65
RER1-201ENST00000306256 IDI2Q9BXS1 227 aa25.34■■□□□ 1.65
RER1-201ENST00000306256 ARHGAP39Q9C0H5 1083 aa25.34■■□□□ 1.65
RER1-201ENST00000306256 PTCH2Q9Y6C5 1203 aa25.34■■□□□ 1.65
RER1-201ENST00000306256 ENTPD3O75355 529 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 ZKSCAN2Q63HK3 967 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 SH3BP5LQ7L8J4 393 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 ZSCAN29Q8IWY8 852 aaPredicted RBP25.33■■□□□ 1.65
RER1-201ENST00000306256 DDX4Q9NQI0 724 aaKnown RBP25.33■■□□□ 1.65
RER1-201ENST00000306256 HMG20BQ9P0W2 317 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 KCNH4Q9UQ05 1017 aa25.33■■□□□ 1.65
RER1-201ENST00000306256 MYO5AQ9Y4I1 1855 aaKnown RBP25.33■■□□□ 1.65
RER1-201ENST00000306256 MROH7-TTC4A0A0A0MT08 1334 aa25.33■■□□□ 1.64
RER1-201ENST00000306256 PHIPQ8WWQ0 1821 aa25.33■■□□□ 1.64
RER1-201ENST00000306256 ECM2O94769 699 aaPredicted RBP25.32■■□□□ 1.64
RER1-201ENST00000306256 SLURP2P0DP57 97 aa25.32■■□□□ 1.64
RER1-201ENST00000306256 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
RER1-201ENST00000306256 MECOMQ03112 1051 aa25.32■■□□□ 1.64
RER1-201ENST00000306256 G3BP1Q13283 466 aaKnown RBP eCLIP25.32■■□□□ 1.64
RER1-201ENST00000306256 PICALMQ13492 652 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms