RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TDO2P48775 406 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 CRY2Q49AN0 593 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 RIOK1Q9BRS2 568 aaKnown RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 PANK2Q9BZ23 570 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 NCOA5Q9HCD5 579 aaKnown RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 GPHNQ9NQX3 736 aaPredicted RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 DUOX1Q9NRD9 1551 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 NASPP49321 788 aaPredicted RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 ST5P78524 1137 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 BRIP1Q9BX63 1249 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 CFAP45Q9UL16 551 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 NAP1L2Q9ULW6 460 aaPredicted RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 IQSEC3Q9UPP2 1182 aaPredicted RBP22.77■■□□□ 1.24
HOXC4-201ENST00000303406 B4E1Z4 1266 aa22.76■■□□□ 1.23
HOXC4-201ENST00000303406 PRKAB2O43741 272 aa22.76■■□□□ 1.23
HOXC4-201ENST00000303406 MFSD6Q6ZSS7 791 aa22.76■■□□□ 1.23
HOXC4-201ENST00000303406 XDHP47989 1333 aa22.75■■□□□ 1.23
HOXC4-201ENST00000303406 WTIPA6NIX2 430 aaPredicted RBP22.75■■□□□ 1.23
HOXC4-201ENST00000303406 CDKL5O76039 1030 aa22.75■■□□□ 1.23
HOXC4-201ENST00000303406 PCP11498 1178 aaKnown RBP22.75■■□□□ 1.23
HOXC4-201ENST00000303406 FDPSP14324 419 aaKnown RBP22.75■■□□□ 1.23
HOXC4-201ENST00000303406 RCAN1P53805 252 aa22.75■■□□□ 1.23
HOXC4-201ENST00000303406 ADGRA1Q86SQ6 560 aa22.75■■□□□ 1.23
HOXC4-201ENST00000303406 CCDC88AQ3V6T2 1871 aa22.74■■□□□ 1.23
HOXC4-201ENST00000303406 SPTY2D1Q68D10 685 aaPredicted RBP22.74■■□□□ 1.23
HOXC4-201ENST00000303406 CPLX2Q6PUV4 134 aaKnown RBP22.74■■□□□ 1.23
HOXC4-201ENST00000303406 CCDC24Q8N4L8 307 aa22.74■■□□□ 1.23
HOXC4-201ENST00000303406 MIGA1Q8NAN2 632 aa22.74■■□□□ 1.23
HOXC4-201ENST00000303406 LEO1Q8WVC0 666 aaPredicted RBP22.74■■□□□ 1.23
HOXC4-201ENST00000303406 NSUN4Q96CB9 384 aaKnown RBP22.74■■□□□ 1.23
HOXC4-201ENST00000303406 SPATA32Q96LK8 384 aa22.74■■□□□ 1.23
HOXC4-201ENST00000303406 LY9Q9HBG7 655 aa22.74■■□□□ 1.23
HOXC4-201ENST00000303406 CPLX1O14810 134 aa22.73■■□□□ 1.23
HOXC4-201ENST00000303406 SERPINB2P05120 415 aa22.73■■□□□ 1.23
HOXC4-201ENST00000303406 KLRK1P26718 216 aa22.73■■□□□ 1.23
HOXC4-201ENST00000303406 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
HOXC4-201ENST00000303406 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
HOXC4-201ENST00000303406 APOA5Q6Q788 366 aa22.73■■□□□ 1.23
HOXC4-201ENST00000303406 TSPY26PQ9H489 355 aa22.73■■□□□ 1.23
HOXC4-201ENST00000303406 TRIM37O94972 964 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 METAP2P50579 478 aaKnown RBP eCLIP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 CTDSPL2Q05D32 466 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 PPARAQ07869 468 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 TMTC2Q8N394 836 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 RPGRQ92834 1020 aaKnown RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 RBM17Q96I25 401 aaKnown RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 ZNF396Q96N95 335 aaPredicted RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 RBSNQ9H1K0 784 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 HOXA10P31260 410 aaPredicted RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 CCDC173Q0VFZ6 552 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 SART3Q15020 963 aaKnown RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 TXNRD1Q16881 649 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 ZSWIM5Q9P217 1185 aa22.72■■□□□ 1.23
HOXC4-201ENST00000303406 ORC3Q9UBD5 711 aaPredicted RBP22.72■■□□□ 1.23
HOXC4-201ENST00000303406 PLSCR1O15162 318 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 ZBTB43O43298 467 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 KDM4AO75164 1064 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 ADD1P35611 737 aaKnown RBP22.71■■□□□ 1.23
HOXC4-201ENST00000303406 NT5C2P49902 561 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 FAM173BQ6P4H8 233 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 TMC4Q7Z404 712 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 WDR66Q8TBY9 1149 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 ZNF384Q8TF68 577 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 PPP1R9BQ96SB3 815 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 TACC3Q9Y6A5 838 aa22.71■■□□□ 1.23
HOXC4-201ENST00000303406 STK36Q9NRP7 1315 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 IFIT3O14879 490 aaKnown RBP22.7■■□□□ 1.22
HOXC4-201ENST00000303406 BBOX1O75936 387 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 FGRP09769 529 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 MECOMQ03112 1051 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 TDRD7Q8NHU6 1098 aaKnown RBP22.7■■□□□ 1.22
HOXC4-201ENST00000303406 NKX2-3Q8TAU0 364 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 C8orf76Q96K31 380 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 RCOR1Q9UKL0 485 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 LRRC37AA6NMS7 1700 aa22.7■■□□□ 1.22
HOXC4-201ENST00000303406 NRXN2Q9P2S2 1712 aa22.69■■□□□ 1.22
HOXC4-201ENST00000303406 ATP2B4P23634 1241 aa22.69■■□□□ 1.22
HOXC4-201ENST00000303406 FBXO18Q8NFZ0 1043 aa22.69■■□□□ 1.22
HOXC4-201ENST00000303406 CRAMP1Q96RY5 1269 aa22.69■■□□□ 1.22
HOXC4-201ENST00000303406 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
HOXC4-201ENST00000303406 LAMB1P07942 1786 aa22.68■■□□□ 1.22
HOXC4-201ENST00000303406 CCDC69A6NI79 296 aa22.68■■□□□ 1.22
HOXC4-201ENST00000303406 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
HOXC4-201ENST00000303406 SYNE3Q6ZMZ3 975 aa22.68■■□□□ 1.22
HOXC4-201ENST00000303406 ZNF804AQ7Z570 1209 aa22.68■■□□□ 1.22
HOXC4-201ENST00000303406 ATP8A2Q9NTI2 1148 aa22.68■■□□□ 1.22
HOXC4-201ENST00000303406 GOLGA6L4A6NEF3 574 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 NFXL1Q6ZNB6 911 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 BRAPQ7Z569 592 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 PROM2Q8N271 834 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 SDR42E1Q8WUS8 393 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 ESR2Q92731 530 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 CRNKL1Q9BZJ0 848 aaKnown RBP22.67■■□□□ 1.22
HOXC4-201ENST00000303406 DDX19AQ9NUU7 478 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms