RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 ZMYM6O95789 1325 aa14.98□□□□□ -0.01
HIF3A-204ENST00000300862 PRKAB2O43741 272 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 ZNF202O95125 648 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 MBD4O95243 580 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 YEATS4O95619 227 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
HIF3A-204ENST00000300862 SUSD4Q5VX71 490 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 BRAPQ7Z569 592 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 LRRC8AQ8IWT6 810 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 EPB41L4AQ9HCS5 686 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-204ENST00000300862 TACC3Q9Y6A5 838 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 MROH7-TTC4A0A0A0MT08 1334 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 EXOC5O00471 708 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 ARID4AP29374 1257 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-204ENST00000300862 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-204ENST00000300862 KRT40Q6A162 431 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 PDCL2Q8N4E4 241 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 SPATA5Q8NB90 893 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 LPIN2Q92539 896 aa14.97□□□□□ -0.01
HIF3A-204ENST00000300862 MYH7P12883 1935 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 USP27XA6NNY8 438 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 PFKFB1P16118 471 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 RRP12Q5JTH9 1297 aaKnown RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 IGDCC4Q8TDY8 1250 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 MRFAP1L1Q96HT8 127 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ZNF512BQ96KM6 892 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ZKSCAN3Q9BRR0 538 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ITGB4P16144 1822 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 CTIFO43310 598 aaKnown RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 RANBP6O60518 1105 aaKnown RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 TNNT1P13805 278 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 FGFR2P21802 821 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 CDC25BP30305 580 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 GNL2Q13823 731 aaKnown RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ZRSR1Q15695 479 aaKnown RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ZSWIM5Q9P217 1185 aa14.96□□□□□ -0.01
HIF3A-204ENST00000300862 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-204ENST00000300862 ZBTB43O43298 467 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 SLC3A2P08195 630 aaKnown RBP14.95□□□□□ -0.02
HIF3A-204ENST00000300862 BCAMP50895 628 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 ACSBG1Q96GR2 724 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 MPHOSPH8Q99549 860 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 NAPBQ9H115 298 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 LY9Q9HBG7 655 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.95□□□□□ -0.02
HIF3A-204ENST00000300862 GOLGA8AA7E2F4 631 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 UQCRFS1P1P0C7P4 283 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 ZNF592Q92610 1267 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 CLIC6Q96NY7 704 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 GTPBP4Q9BZE4 634 aaKnown RBP14.95□□□□□ -0.02
HIF3A-204ENST00000300862 FAM217BQ9NTX9 383 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-204ENST00000300862 WDR19Q8NEZ3 1342 aa14.95□□□□□ -0.02
HIF3A-204ENST00000300862 CCDC69A6NI79 296 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 SKILP12757 684 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 IL6STP40189 918 aaPredicted RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 MIGA1Q8NAN2 632 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 SLC26A6Q9BXS9 759 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 NAT10Q9H0A0 1025 aaKnown RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 TRMT1Q9NXH9 659 aaKnown RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 SLC5A1P13866 664 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 IARSP41252 1262 aaKnown RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 SLC39A14Q15043 492 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 CMTR1Q8N1G2 835 aaKnown RBP14.94□□□□□ -0.02
HIF3A-204ENST00000300862 SLIT2O94813 1529 aa14.94□□□□□ -0.02
HIF3A-204ENST00000300862 ERVV-1B6SEH8 477 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
HIF3A-204ENST00000300862 CMA1P23946 247 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 GUCY1A2P33402 732 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 MAP3K12Q12852 859 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 NTRK3Q16288 839 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 MROH5Q6ZUA9 1318 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 LRP6O75581 1613 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 ATRNO75882 1429 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 SMC2O95347 1197 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 SHC4Q6S5L8 630 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 LCORLQ8N3X6 602 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 SLC12A7Q9Y666 1083 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 NUP98P52948 1817 aa14.93□□□□□ -0.02
HIF3A-204ENST00000300862 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
HIF3A-204ENST00000300862 GSG1L2A8MUP6 293 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 CDKL5O76039 1030 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 SPECC1Q5M775 1068 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 INTS5Q6P9B9 1019 aaKnown RBP14.92□□□□□ -0.02
HIF3A-204ENST00000300862 CPLX2Q6PUV4 134 aaKnown RBP14.92□□□□□ -0.02
HIF3A-204ENST00000300862 TMEM87BQ96K49 555 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 XPO4Q9C0E2 1151 aaKnown RBP14.92□□□□□ -0.02
HIF3A-204ENST00000300862 IFNKQ9P0W0 207 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 MYH3P11055 1940 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms