RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 KLHL40Q2TBA0 621 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 SMARCC2Q8TAQ2 1214 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 ZNF274Q96GC6 653 aaPredicted RBP30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 BRIP1Q9BX63 1249 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 GGA1Q9UJY5 639 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 PDS5AQ29RF7 1337 aaKnown RBP30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 SRGNP10124 158 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 TPRNQ4KMQ1 711 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 RRP12Q5JTH9 1297 aaKnown RBP30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 TBC1D16Q8TBP0 767 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 NACAP1Q9BZK3 213 aa30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 RBM27Q9P2N5 1060 aaKnown RBP30.22■■■□□ 2.43
SDCCAG3-201ENST00000298537 PTPDC1A2A3K4 754 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 MINDY4BA8MYZ0 360 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 KDM4AO75164 1064 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 RXRAP19793 462 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 EVCP57679 992 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 DNM1Q05193 864 aaKnown RBP30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 ZSWIM5Q9P217 1185 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 PTMSP20962 102 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 AKNAD1Q5T1N1 836 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 USP48Q86UV5 1035 aa30.21■■■□□ 2.43
SDCCAG3-201ENST00000298537 PPEF1O14829 653 aaPredicted RBP30.2■■■□□ 2.43
SDCCAG3-201ENST00000298537 CAMKK2Q96RR4 588 aa30.2■■■□□ 2.43
SDCCAG3-201ENST00000298537 GOLGA8BA8MQT2 603 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 ZKSCAN3Q9BRR0 538 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 CD209Q9NNX6 404 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 PARP3Q9Y6F1 533 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 SH2B2O14492 632 aaPredicted RBP30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 PPARAQ07869 468 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 CAVIN1Q6NZI2 390 aaKnown RBP30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 ZNF804AQ7Z570 1209 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 PDGFDQ9GZP0 370 aaPredicted RBP30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 TOMM22Q9NS69 142 aa30.19■■■□□ 2.42
SDCCAG3-201ENST00000298537 NRXN2Q9P2S2 1712 aa30.18■■■□□ 2.42
SDCCAG3-201ENST00000298537 ATP2B4P23634 1241 aa30.18■■■□□ 2.42
SDCCAG3-201ENST00000298537 DIXDC1Q155Q3 683 aa30.18■■■□□ 2.42
SDCCAG3-201ENST00000298537 BAZ2AQ9UIF9 1905 aaKnown RBP30.18■■■□□ 2.42
SDCCAG3-201ENST00000298537 FLAD1Q8NFF5 587 aa30.18■■■□□ 2.42
SDCCAG3-201ENST00000298537 C6orf229H3BNL8 230 aa30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 MFSD6Q6ZSS7 791 aa30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 IGDCC4Q8TDY8 1250 aa30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 ANGEL1Q9UNK9 670 aaKnown RBP30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 SALL1Q9NSC2 1324 aa30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 FIBPO43427 364 aa30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 C15orf52Q6ZUT6 534 aaKnown RBP30.17■■■□□ 2.42
SDCCAG3-201ENST00000298537 FDPSP14324 419 aaKnown RBP30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 DZIP1Q86YF9 867 aaKnown RBP30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 STAG1Q8WVM7 1258 aa30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 MYL10Q9BUA6 226 aa30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 PODXL2Q9NZ53 605 aa30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 RIMBP2O15034 1052 aa30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 SLC15A2Q16348 729 aa30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 LLPHQ9BRT6 129 aaKnown RBP30.16■■■□□ 2.42
SDCCAG3-201ENST00000298537 CHD4Q14839 1912 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 COL11A2P13942 1736 aaPredicted RBP30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 TIAM2Q8IVF5 1701 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 PDCP20941 246 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 SLC4A8Q2Y0W8 1093 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 GAS2L3Q86XJ1 694 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 CCDC144CPQ8IYA2 1237 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 LY9Q9HBG7 655 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 WDR19Q8NEZ3 1342 aa30.15■■■□□ 2.42
SDCCAG3-201ENST00000298537 HMGB2P26583 209 aaKnown RBP30.14■■■□□ 2.42
SDCCAG3-201ENST00000298537 FAM184AQ8NB25 1140 aa30.14■■■□□ 2.42
SDCCAG3-201ENST00000298537 LDHBP07195 334 aaKnown RBP30.14■■■□□ 2.42
SDCCAG3-201ENST00000298537 ATP6V0A2Q9Y487 856 aa30.14■■■□□ 2.42
SDCCAG3-201ENST00000298537 CTR9Q6PD62 1173 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 DEFB132Q7Z7B7 95 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 SP8Q8IXZ3 490 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 WDR66Q8TBY9 1149 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 GUCY1B3Q02153 619 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 TMEM67Q5HYA8 995 aa30.13■■■□□ 2.41
SDCCAG3-201ENST00000298537 LTBP1Q14766 1721 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 PRDM1O75626 825 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 CYP2D6P10635 497 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 NPR1P16066 1061 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 USP17L12C9JPN9 530 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 USP17L21D6R901 530 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 ADD1P35611 737 aaKnown RBP30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 TMEM63CQ9P1W3 806 aa30.12■■■□□ 2.41
SDCCAG3-201ENST00000298537 IL1R1P14778 569 aa30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 APOA5Q6Q788 366 aa30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 DCP1AQ9NPI6 582 aaPredicted RBP30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 LRRC37AA6NMS7 1700 aa30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 IFIT3O14879 490 aaKnown RBP30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 MICU3Q86XE3 530 aa30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 ZNF622Q969S3 477 aaKnown RBP eCLIP30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 GJB4Q9NTQ9 266 aa30.11■■■□□ 2.41
SDCCAG3-201ENST00000298537 CDC27P30260 824 aa30.1■■■□□ 2.41
SDCCAG3-201ENST00000298537 OTUD7BQ6GQQ9 843 aa30.1■■■□□ 2.41
SDCCAG3-201ENST00000298537 FSD2A1L4K1 749 aa30.1■■■□□ 2.41
SDCCAG3-201ENST00000298537 KRT23Q9C075 422 aa30.1■■■□□ 2.41
SDCCAG3-201ENST00000298537 CCDC88AQ3V6T2 1871 aa30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 H3BQV1 296 aa30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 PDE6BP35913 854 aa30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 IFFO2Q5TF58 517 aa30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 SPTY2D1Q68D10 685 aaPredicted RBP30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 NFXL1Q6ZNB6 911 aa30.09■■■□□ 2.41
SDCCAG3-201ENST00000298537 TMEM87BQ96K49 555 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms