RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 BAG3O95817 575 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 KRT32Q14532 448 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 NIM1KQ8IY84 436 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 VIL1P09327 827 aaKnown RBP29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 PRELPP51888 382 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 NEK4P51957 841 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 IMMTQ16891 758 aaKnown RBP29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 GIMAP6Q6P9H5 292 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 HHIPL2Q6UWX4 724 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 CERS3Q8IU89 383 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 SDR42E1Q8WUS8 393 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 NACAP1Q9BZK3 213 aa29.34■■■□□ 2.29
GTF2A1-201ENST00000298173 JAKMIP1Q96N16 626 aaKnown RBP29.33■■■□□ 2.29
GTF2A1-201ENST00000298173 DAGLAQ9Y4D2 1042 aa29.33■■■□□ 2.29
GTF2A1-201ENST00000298173 F8W031 263 aaPredicted RBP29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 PSMA5P28066 241 aa29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 HDLBPQ00341 1268 aaKnown RBP29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 STOX1Q6ZVD7 989 aa29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 UPF3BQ9BZI7 483 aaKnown RBP29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 CRNKL1Q9BZJ0 848 aaKnown RBP29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 NAPBQ9H115 298 aa29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 LAMA4Q16363 1823 aa29.32■■■□□ 2.28
GTF2A1-201ENST00000298173 ZNF213O14771 459 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 BTDP43251 543 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 PSMD14O00487 310 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 CASTP20810 708 aaKnown RBP29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 RASSF7Q02833 373 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 BECN1Q14457 450 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 JDP2Q8WYK2 163 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 GMLQ99445 158 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 ATP8A2Q9NTI2 1148 aa29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 MKRN1Q9UHC7 482 aaKnown RBP29.31■■■□□ 2.28
GTF2A1-201ENST00000298173 ST18O60284 1047 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 RAD17O75943 681 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 RHBDL3P58872 404 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 COL9A3Q14050 684 aaPredicted RBP29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 RSBN1LQ6PCB5 846 aaPredicted RBP29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 RUFY3Q7L099 469 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 KIAA0825Q8IV33 1275 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 SH3RF3Q8TEJ3 882 aaPredicted RBP29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 TTC14Q96N46 770 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 NOL10Q9BSC4 688 aaKnown RBP29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 NBPF3Q9H094 633 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 CDK5RAP2Q96SN8 1893 aa29.3■■■□□ 2.28
GTF2A1-201ENST00000298173 BAZ2AQ9UIF9 1905 aaKnown RBP29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 MYO3BQ8WXR4 1341 aa29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 E7EWF7 191 aa29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 HAND2P61296 217 aa29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 CXCL9Q07325 125 aa29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 DCP1AQ9NPI6 582 aaPredicted RBP29.29■■■□□ 2.28
GTF2A1-201ENST00000298173 SCNN1DP51172 638 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 TEKT1Q969V4 418 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 NEK1Q96PY6 1258 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 PLCG2P16885 1265 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 TDO2P48775 406 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 CYP46A1Q9Y6A2 500 aa29.28■■■□□ 2.28
GTF2A1-201ENST00000298173 CPA1P15085 419 aa29.27■■■□□ 2.28
GTF2A1-201ENST00000298173 CRKP46108 304 aa29.27■■■□□ 2.28
GTF2A1-201ENST00000298173 APOBEC3HQ6NTF7 200 aaKnown RBP29.27■■■□□ 2.28
GTF2A1-201ENST00000298173 ZDHHC15Q96MV8 337 aa29.27■■■□□ 2.28
GTF2A1-201ENST00000298173 SOCS7O14512 581 aa29.26■■■□□ 2.27
GTF2A1-201ENST00000298173 SERPINA10Q9UK55 444 aa29.26■■■□□ 2.27
GTF2A1-201ENST00000298173 ADAMTSL1Q8N6G6 1762 aa29.26■■■□□ 2.27
GTF2A1-201ENST00000298173 SLC4A3P48751 1232 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 BLOC1S2Q6QNY1 142 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 HSCBQ8IWL3 235 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 ANAPC4Q9UJX5 808 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 SBF1O95248 1867 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 FZD9O00144 591 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 RPS6KB1P23443 525 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 CTR9Q6PD62 1173 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 ARHGAP27Q6ZUM4 889 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 AGBL3Q8NEM8 1001 aa29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 ALDH8A1Q9H2A2 487 aaPredicted RBP29.25■■■□□ 2.27
GTF2A1-201ENST00000298173 DICER1Q9UPY3 1922 aaKnown RBP29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 FOCADQ5VW36 1801 aa29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 HMGB1P09429 215 aaKnown RBP29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 SBK1Q52WX2 424 aa29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 CIAPIN1Q6FI81 312 aa29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 TBC1D10CQ8IV04 446 aa29.24■■■□□ 2.27
GTF2A1-201ENST00000298173 MCM2P49736 904 aa29.23■■■□□ 2.27
GTF2A1-201ENST00000298173 TIAM2Q8IVF5 1701 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 USP17L12C9JPN9 530 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 USP17L21D6R901 530 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 YBX3P16989 372 aaKnown RBP eCLIP29.22■■■□□ 2.272e-6■□□□□ 8.2
GTF2A1-201ENST00000298173 PPARAQ07869 468 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 TGFBRAP1Q8WUH2 860 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 PDRG1Q9NUG6 133 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 ZBTB12Q9Y330 459 aaPredicted RBP29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 TACC3Q9Y6A5 838 aa29.22■■■□□ 2.27
GTF2A1-201ENST00000298173 K7ELQ4 463 aaPredicted RBP29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 EXOSC10Q01780 885 aaKnown RBP29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 TEX11Q8IYF3 940 aa29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 USP5P45974 858 aa29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 CTDSPL2Q05D32 466 aa29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 TNIP1Q15025 636 aa29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 DHX32Q7L7V1 743 aaKnown RBP29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 ECM29Q5VYK3 1845 aa29.21■■■□□ 2.27
GTF2A1-201ENST00000298173 CDC42EP5Q6NZY7 148 aa29.2■■■□□ 2.26
GTF2A1-201ENST00000298173 STAG1Q8WVM7 1258 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms