RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 LY9Q9HBG7 655 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 ATRNO75882 1429 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 PATL2C9JE40 543 aaKnown RBP13.76□□□□□ -0.21
RHO-201ENST00000296271 MARCKSP29966 332 aaPredicted RBP13.76□□□□□ -0.21
RHO-201ENST00000296271 GUCY1A2P33402 732 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
RHO-201ENST00000296271 MAP3K12Q12852 859 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
RHO-201ENST00000296271 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
RHO-201ENST00000296271 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
RHO-201ENST00000296271 NDUFA8P51970 172 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 DYNLL1P63167 89 aaKnown RBP13.75□□□□□ -0.21
RHO-201ENST00000296271 TMEM67Q5HYA8 995 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
RHO-201ENST00000296271 PYCARDQ9ULZ3 195 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 ZNF165P49910 485 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 SASS6Q6UVJ0 657 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 ZNF384Q8TF68 577 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
RHO-201ENST00000296271 C4AP0C0L4 1744 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 C4BP0C0L5 1744 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
RHO-201ENST00000296271 TDO2P48775 406 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
RHO-201ENST00000296271 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 ALG1Q9BT22 464 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 CYP7A1P22680 504 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 PTGS1P23219 599 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 RAI14Q9P0K7 980 aa13.74□□□□□ -0.21
RHO-201ENST00000296271 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 PRDM1O75626 825 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
RHO-201ENST00000296271 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
RHO-201ENST00000296271 STK38Q15208 465 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 NTRK3Q16288 839 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 ISM2Q6H9L7 571 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
RHO-201ENST00000296271 KIF3AQ9Y496 699 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 ZBTB43O43298 467 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 LRMPQ12912 555 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 KRT40Q6A162 431 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 BARGINQ6ZT62 677 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 MINPP1Q9UNW1 487 aa13.73□□□□□ -0.21
RHO-201ENST00000296271 GOLGA8AA7E2F4 631 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 BIN1O00499 593 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 AK7Q96M32 723 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 SLC26A6Q9BXS9 759 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 ARAP2Q8WZ64 1704 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
RHO-201ENST00000296271 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 VPS37DQ86XT2 251 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 FMR1NBQ8N0W7 255 aaPredicted RBP13.72□□□□□ -0.21
RHO-201ENST00000296271 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 KCNJ14Q9UNX9 436 aa13.72□□□□□ -0.21
RHO-201ENST00000296271 DHX16O60231 1041 aaKnown RBP13.71□□□□□ -0.21
RHO-201ENST00000296271 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 CHMP4CQ96CF2 233 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
RHO-201ENST00000296271 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 DOCK2Q92608 1830 aa13.71□□□□□ -0.21
RHO-201ENST00000296271 SPTLC2O15270 562 aa13.71□□□□□ -0.22
RHO-201ENST00000296271 KINO60870 393 aaKnown RBP13.71□□□□□ -0.22
RHO-201ENST00000296271 ARID5BQ14865 1188 aa13.71□□□□□ -0.22
RHO-201ENST00000296271 IQCB1Q15051 598 aa13.71□□□□□ -0.22
RHO-201ENST00000296271 SPECC1Q5M775 1068 aa13.71□□□□□ -0.22
RHO-201ENST00000296271 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 GNPATO15228 680 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 ALX1Q15699 326 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 TSC1Q92574 1164 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 SLC12A7Q9Y666 1083 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 CCDC144BQ3MJ40 725 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 AXDND1Q5T1B0 1012 aaPredicted RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 ANO1Q5XXA6 986 aa13.7□□□□□ -0.22
RHO-201ENST00000296271 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
RHO-201ENST00000296271 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms