RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 E4F1Q66K89 784 aaPredicted RBP17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 CCDC102BQ68D86 513 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 RREB1Q92766 1687 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 TTLL5Q6EMB2 1281 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 SYT10Q6XYQ8 523 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 CREBRFQ8IUR6 639 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 CCAR1Q8IX12 1150 aaKnown RBP17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 AOPEPQ8N6M6 819 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 MYH3P11055 1940 aa17.73■□□□□ 0.43
LRRTM1-201ENST00000295057 CYP2C19P33261 490 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 RNF20Q5VTR2 975 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 STOX1Q6ZVD7 989 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 TRIM34Q9BYJ4 488 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 H3BQV1 296 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 HNRNPH2P55795 449 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
LRRTM1-201ENST00000295057 BTAF1O14981 1849 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 PPP1R13BQ96KQ4 1090 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 L2HGDHQ9H9P8 463 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 RFX7Q2KHR2 1363 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 FGFR2P21802 821 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 PLA2G4AP47712 749 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 PUM3Q15397 648 aaKnown RBP17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 LRRC4BQ9NT99 713 aa17.71■□□□□ 0.43
LRRTM1-201ENST00000295057 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 AK7Q96M32 723 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 FOXP2O15409 715 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 ARHGAP29Q52LW3 1261 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 MROH5Q6ZUA9 1318 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
LRRTM1-201ENST00000295057 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 BCAMP50895 628 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 LPIN2Q92539 896 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 CFAP45Q9UL16 551 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 CHRNDQ07001 517 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 ARMCX5Q6P1M9 558 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
LRRTM1-201ENST00000295057 ZPR1O75312 459 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 HAND2P61296 217 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 NEK1Q96PY6 1258 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 POLR3GO15318 223 aaPredicted RBP17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 SLC9C2Q5TAH2 1124 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 CHST3Q7LGC8 479 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
LRRTM1-201ENST00000295057 TAF1P21675 1872 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 RASGRF1Q13972 1273 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 ANO10Q9NW15 660 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 CTAGE5O15320 804 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 Q6ZUG5 572 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 NEK11Q8NG66 645 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 SETDB2Q96T68 719 aa17.67■□□□□ 0.42
LRRTM1-201ENST00000295057 KIF2AO00139 706 aaPredicted RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 GSDMDP57764 484 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 SCRN1Q12765 414 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 TMC6Q7Z403 805 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms