RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PNMA6EA0A0J9YXQ4 647 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
PTCD1-201ENST00000292478 ZFYVE16Q7Z3T8 1539 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 NSRP1Q9H0G5 558 aaKnown RBP14.42□□□□□ -0.1
PTCD1-201ENST00000292478 A0A1B0GVL5 298 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 TEX11Q8IYF3 940 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 KCNH3Q9ULD8 1083 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 KDRP35968 1356 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 VWA3BQ502W6 1294 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 MLKLQ8NB16 471 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 SSH3Q8TE77 659 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
PTCD1-201ENST00000292478 MYO5CQ9NQX4 1742 aa14.42□□□□□ -0.1
PTCD1-201ENST00000292478 CNNM4Q6P4Q7 775 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 CCDC129Q6ZRS4 1044 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 BAG1Q99933 345 aaPredicted RBP14.41□□□□□ -0.1
PTCD1-201ENST00000292478 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 SYNMO15061 1565 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 CNBD1Q8NA66 436 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 LRRC45Q96CN5 670 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 CPA1P15085 419 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 STX17P56962 302 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 SYNCQ9H7C4 482 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 NF2P35240 595 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 PRDM10Q9NQV6 1147 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 RXRAP19793 462 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 TSNARE1Q96NA8 513 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 ARMT1Q9H993 441 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 HOMER2Q9NSB8 354 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 MYOM2P54296 1465 aa14.41□□□□□ -0.1
PTCD1-201ENST00000292478 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 MRVI1Q9Y6F6 885 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 ZNF174Q15697 407 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 MAGI3Q5TCQ9 1506 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 GNPATO15228 680 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
PTCD1-201ENST00000292478 MSANTD4Q8NCY6 345 aa14.4□□□□□ -0.1
PTCD1-201ENST00000292478 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
PTCD1-201ENST00000292478 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF569Q5MCW4 686 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 HAUS3Q68CZ6 603 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 SREK1Q8WXA9 508 aaKnown RBP14.39□□□□□ -0.11
PTCD1-201ENST00000292478 TFCP2L1Q9NZI6 479 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 NLRP12P59046 1061 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 TNNC1P63316 161 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 ZKSCAN3Q9BRR0 538 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 NUP58Q9BVL2 599 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 RBSNQ9H1K0 784 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 TTF2Q9UNY4 1162 aaKnown RBP14.39□□□□□ -0.11
PTCD1-201ENST00000292478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTCD1-201ENST00000292478 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 GUCA1BQ9UMX6 200 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
PTCD1-201ENST00000292478 SPATA5Q8NB90 893 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 GGA1Q9UJY5 639 aa14.39□□□□□ -0.11
PTCD1-201ENST00000292478 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 LETM2Q2VYF4 491 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 C6orf163Q5TEZ5 329 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 SYT10Q6XYQ8 523 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 ARFGAP2Q8N6H7 521 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 TTC38Q5R3I4 469 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 ATP7BP35670 1465 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 EPB41P11171 864 aaKnown RBP14.38□□□□□ -0.11
PTCD1-201ENST00000292478 VAV2P52735 878 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 NCBP1Q09161 790 aaKnown RBP14.38□□□□□ -0.11
PTCD1-201ENST00000292478 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 TTC14Q96N46 770 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 VEZTQ9HBM0 779 aa14.38□□□□□ -0.11
PTCD1-201ENST00000292478 A0A1W2PRG0 241 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 UFL1O94874 794 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 BRD1O95696 1058 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 TCIRG1Q13488 830 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 FRMD4BQ9Y2L6 1034 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 TTC37Q6PGP7 1564 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 CYP26C1Q6V0L0 522 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 GIGYF1O75420 1035 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 KIF4AO95239 1232 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 A1BGP04217 495 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 MCM6Q14566 821 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF75DP51815 510 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms