RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
SMAD6-201ENST00000288840 WASF1Q92558 559 aa18.27■□□□□ 0.52
SMAD6-201ENST00000288840 FUCA2Q9BTY2 467 aa18.27■□□□□ 0.52
SMAD6-201ENST00000288840 NEMFO60524 1076 aa18.27■□□□□ 0.51
SMAD6-201ENST00000288840 SPATA5Q8NB90 893 aa18.27■□□□□ 0.51
SMAD6-201ENST00000288840 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 GYG1P46976 350 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 ZNF174Q15697 407 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 TSR1Q2NL82 804 aaKnown RBP18.26■□□□□ 0.51
SMAD6-201ENST00000288840 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
SMAD6-201ENST00000288840 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 TBC1D10CQ8IV04 446 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
SMAD6-201ENST00000288840 KIF28PB7ZC32 967 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 PCCAP05165 728 aaPredicted RBP18.25■□□□□ 0.51
SMAD6-201ENST00000288840 NLRP5P59047 1200 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
SMAD6-201ENST00000288840 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 PDE8AO60658 829 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 PDE8BO95263 885 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 NR5A1Q13285 461 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
SMAD6-201ENST00000288840 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 V9GY48 417 aaPredicted RBP18.25■□□□□ 0.51
SMAD6-201ENST00000288840 UTYO14607 1347 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 CCDC196A0A1B0GTZ2 297 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
SMAD6-201ENST00000288840 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 FILIP1LQ4L180 1135 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 VAT1LQ9HCJ6 419 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 FANCLQ9NW38 375 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ARGLU1Q9NWB6 273 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 COL15A1P39059 1388 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 CYP2D7A0A087X1C5 515 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ANKRD20A12PQ8NF67 263 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 RTEL1Q9NZ71 1219 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 EXOSC10Q01780 885 aaKnown RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 MYL5Q02045 173 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 IFIT1BQ5T764 474 aaKnown RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 KRI1Q8N9T8 703 aaKnown RBP18.24■□□□□ 0.51
SMAD6-201ENST00000288840 SMARCC2Q8TAQ2 1214 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 LZTFL1Q9NQ48 299 aa18.24■□□□□ 0.51
SMAD6-201ENST00000288840 ADKP55263 362 aaKnown RBP18.23■□□□□ 0.51
SMAD6-201ENST00000288840 GPIHBP1Q8IV16 184 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
SMAD6-201ENST00000288840 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 NOL10Q9BSC4 688 aaKnown RBP18.23■□□□□ 0.51
SMAD6-201ENST00000288840 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 CDC27P30260 824 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 LPIN2Q92539 896 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 KCNB2Q92953 911 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 KRT23Q9C075 422 aa18.23■□□□□ 0.51
SMAD6-201ENST00000288840 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
SMAD6-201ENST00000288840 NLRP12P59046 1061 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 CGNQ9P2M7 1197 aaKnown RBP18.22■□□□□ 0.51
SMAD6-201ENST00000288840 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 VWA3AA6NCI4 1184 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 YEATS4O95619 227 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 ERCC6LQ2NKX8 1250 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 CCDC150Q8NCX0 1101 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
SMAD6-201ENST00000288840 NFE2L3Q9Y4A8 694 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 KDM6AO15550 1401 aaPredicted RBP18.22■□□□□ 0.51
SMAD6-201ENST00000288840 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 ADD2P35612 726 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 ARHGAP29Q52LW3 1261 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 MEGF6O75095 1541 aa18.22■□□□□ 0.51
SMAD6-201ENST00000288840 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 USP5P45974 858 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 ESR2Q92731 530 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 ATL3Q6DD88 541 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 DESI2Q9BSY9 194 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 MKNK2Q9HBH9 465 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 FOXN1O15353 648 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 CASP1P29466 404 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 MCM7P33993 719 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms