RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PRMT6Q96LA8 375 aaPredicted RBP26.2■■□□□ 1.78
PDLIM3-203ENST00000284771 RHBDL3P58872 404 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 PTH1RQ03431 593 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 GPRC5DQ9NZD1 345 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 HDAC9Q9UKV0 1011 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 GLTPD2A6NH11 291 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 PRKAB2O43741 272 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 RBM5P52756 815 aaKnown RBP eCLIP26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 DPY19L2Q6NUT2 758 aa26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 LSG1Q9H089 658 aaKnown RBP26.19■■□□□ 1.78
PDLIM3-203ENST00000284771 EPS15P42566 896 aa26.18■■□□□ 1.78
PDLIM3-203ENST00000284771 SH3RF3Q8TEJ3 882 aaPredicted RBP26.18■■□□□ 1.78
PDLIM3-203ENST00000284771 MYOZ2Q9NPC6 264 aa26.18■■□□□ 1.78
PDLIM3-203ENST00000284771 HSPD1P10809 573 aaKnown RBP26.17■■□□□ 1.78
PDLIM3-203ENST00000284771 MFAP1P55081 439 aaKnown RBP26.17■■□□□ 1.78
PDLIM3-203ENST00000284771 SAMD7Q7Z3H4 446 aa26.17■■□□□ 1.78
PDLIM3-203ENST00000284771 ZBED3Q96IU2 234 aaPredicted RBP26.17■■□□□ 1.78
PDLIM3-203ENST00000284771 SPDYE2BA6NHP3 402 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 BAG3O95817 575 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 SPDYE6P0CI01 402 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 CDC42EP5Q6NZY7 148 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 MTMR14Q8NCE2 650 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 ANO2Q9NQ90 1003 aa26.16■■□□□ 1.78
PDLIM3-203ENST00000284771 SDR42E1Q8WUS8 393 aa26.15■■□□□ 1.78
PDLIM3-203ENST00000284771 GSG1L2A8MUP6 293 aa26.15■■□□□ 1.78
PDLIM3-203ENST00000284771 L3MBTL3Q96JM7 780 aaPredicted RBP26.15■■□□□ 1.78
PDLIM3-203ENST00000284771 WNT10BO00744 389 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 MMP14P50281 582 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 DLGAP5Q15398 846 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 NBPF9Q3BBW0 867 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 RBM26Q5T8P6 1007 aaKnown RBP26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 CDK5RAP2Q96SN8 1893 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 USP26Q9BXU7 913 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 TDRD3Q9H7E2 651 aaKnown RBP26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 USP40Q9NVE5 1235 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 SLC4A4Q9Y6R1 1079 aa26.14■■□□□ 1.78
PDLIM3-203ENST00000284771 TBC1D10BQ4KMP7 808 aaPredicted RBP26.13■■□□□ 1.77
PDLIM3-203ENST00000284771 MAP4K1Q92918 833 aa26.13■■□□□ 1.77
PDLIM3-203ENST00000284771 PATL2C9JE40 543 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 REC8O95072 547 aa26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 NOL10Q9BSC4 688 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 EPB41L4AQ9HCS5 686 aaPredicted RBP26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 POTECB2RU33 542 aa26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 H7C1D1 291 aa26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 WDHD1O75717 1129 aaPredicted RBP26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 KIAA1211Q6ZU35 1233 aa26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 DSCC1Q9BVC3 393 aa26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 MKRN1Q9UHC7 482 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-203ENST00000284771 HIRAP54198 1017 aaPredicted RBP26.11■■□□□ 1.77
PDLIM3-203ENST00000284771 CACNB3P54284 484 aa26.11■■□□□ 1.77
PDLIM3-203ENST00000284771 TRPM4Q8TD43 1214 aa26.11■■□□□ 1.77
PDLIM3-203ENST00000284771 TGFBRAP1Q8WUH2 860 aa26.11■■□□□ 1.77
PDLIM3-203ENST00000284771 ECM29Q5VYK3 1845 aa26.11■■□□□ 1.77
PDLIM3-203ENST00000284771 FGAP02671 866 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 PLCG2P16885 1265 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 GNAT2P19087 354 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 NFIAQ12857 509 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 TEX11Q8IYF3 940 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 IFNL3Q8IZI9 196 aa26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 CRNKL1Q9BZJ0 848 aaKnown RBP26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 DCP1AQ9NPI6 582 aaPredicted RBP26.1■■□□□ 1.77
PDLIM3-203ENST00000284771 APPP05067 770 aa26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 KIF4BQ2VIQ3 1234 aa26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 CERS3Q8IU89 383 aa26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 DDX4Q9NQI0 724 aaKnown RBP26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 ASTN2O75129 1339 aaPredicted RBP26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 BAZ2AQ9UIF9 1905 aaKnown RBP26.09■■□□□ 1.77
PDLIM3-203ENST00000284771 FOCADQ5VW36 1801 aa26.08■■□□□ 1.77
PDLIM3-203ENST00000284771 CLRN2A0PK11 232 aa26.08■■□□□ 1.77
PDLIM3-203ENST00000284771 ZNF70Q9UC06 446 aaPredicted RBP26.08■■□□□ 1.77
PDLIM3-203ENST00000284771 RBM8AQ9Y5S9 174 aaKnown RBP26.08■■□□□ 1.77
PDLIM3-203ENST00000284771 LMOD1P29536 600 aaPredicted RBP26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 NECTIN1Q15223 517 aa26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 SPDYE2Q495Y8 402 aa26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 MAPKAPK5Q8IW41 473 aa26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 ATP8A2Q9NTI2 1148 aa26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 WDR90Q96KV7 1748 aa26.07■■□□□ 1.76
PDLIM3-203ENST00000284771 ALX1Q15699 326 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 IDI2Q9BXS1 227 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 ADARB2Q9NS39 739 aaKnown RBP26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 FAM198AQ9UFP1 575 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 FLT1P17948 1338 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 RPAP1Q9BWH6 1393 aaPredicted RBP26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 SMIM22K7EJ46 135 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 USP5P45974 858 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 ZFPM1Q8IX07 1006 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 HACL1Q9UJ83 578 aa26.06■■□□□ 1.76
PDLIM3-203ENST00000284771 EPB41L2O43491 1005 aaKnown RBP26.05■■□□□ 1.76
PDLIM3-203ENST00000284771 EVX2Q03828 476 aa26.05■■□□□ 1.76
PDLIM3-203ENST00000284771 PICALMQ13492 652 aa26.05■■□□□ 1.76
PDLIM3-203ENST00000284771 SCAF8Q9UPN6 1271 aaKnown RBP26.05■■□□□ 1.76
PDLIM3-203ENST00000284771 SCN4AP35499 1836 aa26.05■■□□□ 1.76
PDLIM3-203ENST00000284771 GIMAP6Q6P9H5 292 aa26.04■■□□□ 1.76
PDLIM3-203ENST00000284771 EPHX2P34913 555 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 HSPA4P34932 840 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 CTR9Q6PD62 1173 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 NAPBQ9H115 298 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 TAF6LQ9Y6J9 622 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 U3KPZ7 1027 aaPredicted RBP26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 CYP2D7A0A087X1C5 515 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms