RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
TRAPPC8-201ENST00000283351 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
TRAPPC8-201ENST00000283351 RPL13P26373 211 aaKnown RBP16.63■□□□□ 0.25
TRAPPC8-201ENST00000283351 UBASH3AP57075 661 aa16.63■□□□□ 0.25
TRAPPC8-201ENST00000283351 KLHDC4Q8TBB5 520 aa16.63■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 PSMC4P43686 418 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 CFAP58Q5T655 872 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCDC114Q96M63 670 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 TBC1D22AQ8WUA7 517 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 DDX12PQ92771 950 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 PCF11O94913 1555 aaKnown RBP16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 VWA3AA6NCI4 1184 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRAPPC8-201ENST00000283351 RPS8P62241 208 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 MRPS27Q92552 414 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 CTAGE1Q96RT6 745 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 SELENOOQ9BVL4 669 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 ALAS1P13196 640 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 TXKP42681 527 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 SPAG1Q07617 926 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCDC14Q49A88 953 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 RNF187Q5TA31 235 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCDC171Q6TFL3 1326 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 PPP2R5DQ14738 602 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 TTLL3Q9Y4R7 772 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 RASAL2Q9UJF2 1139 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 TRAF5O00463 557 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 GSDMDP57764 484 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 MXRA7P84157 204 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 NLRX1Q86UT6 975 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 BICDL2A1A5D9 508 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 GNG11P61952 73 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 GEN1Q17RS7 908 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 ARHGAP45Q92619 1136 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 C16orf45Q96MC5 204 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 FAM107BQ9H098 131 aa16.6■□□□□ 0.25
TRAPPC8-201ENST00000283351 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 EPB41P11171 864 aaKnown RBP16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 IFRD2Q12894 506 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 HAUS3Q68CZ6 603 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 PPP1R21Q6ZMI0 780 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 ERICH4A6NGS2 130 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 STK25O00506 426 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 EXOC7Q9UPT5 735 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 SPTLC2O15270 562 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 E7EVH7 732 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 GSDMBQ8TAX9 411 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 ABCC1P33527 1531 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 CD19P15391 556 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 CEP112Q8N8E3 955 aa16.59■□□□□ 0.25
TRAPPC8-201ENST00000283351 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 RIOK3O14730 519 aaKnown RBP16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 RIOK1Q9BRS2 568 aaKnown RBP16.58■□□□□ 0.25
TRAPPC8-201ENST00000283351 Q3C1V9 767 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 LPIN2Q92539 896 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 CCDC77Q9BR77 488 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 PFDN4Q9NQP4 134 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 CLRN2A0PK11 232 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 IGBP1P78318 339 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 USPL1Q5W0Q7 1092 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 LMBR1Q8WVP7 490 aa16.58■□□□□ 0.24
TRAPPC8-201ENST00000283351 PRPF6O94906 941 aaKnown RBP16.57■□□□□ 0.24
TRAPPC8-201ENST00000283351 ADCY7P51828 1080 aa16.57■□□□□ 0.24
TRAPPC8-201ENST00000283351 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
TRAPPC8-201ENST00000283351 UBXN1Q04323 297 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms