RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CNNM4Q6P4Q7 775 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CDC37L1Q7L3B6 337 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 USP48Q86UV5 1035 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 SIRT1Q96EB6 747 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 ZNF277Q9NRM2 450 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 BABAM1Q9NWV8 329 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 THOC2Q8NI27 1593 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 ACEP12821 1306 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 TRIML1Q8N9V2 468 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCNL1Q9UK58 526 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 MAP3K5Q99683 1374 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC121Q6ZUS5 278 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ARHGAP24Q8N264 748 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 LARGE2Q8N3Y3 721 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 MBIPQ9NS73 344 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 FAM8A1Q9UBU6 413 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ARHGEF37A1IGU5 675 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 PALM3A6NDB9 673 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 UFL1O94874 794 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 TUBB2AQ13885 445 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 IDI1Q13907 227 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 WAPLQ7Z5K2 1190 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 LEO1Q8WVC0 666 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 TUBB2BQ9BVA1 445 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 GGA1Q9UJY5 639 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CDK13Q14004 1512 aaKnown RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 PTPN23Q9H3S7 1636 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 I3L4J1 428 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 WDR46O15213 610 aaKnown RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 FLOT1O75955 427 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 UBASH3AP57075 661 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 GNPTABQ3T906 1256 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ITSN2Q9NZM3 1697 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ZSCAN22P10073 491 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 GJC1P36383 396 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SLC1A4P43007 532 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SH3BGRP55822 239 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 PPP2R5EQ16537 467 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ZNF569Q5MCW4 686 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SV2BQ7L1I2 683 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 KRT25Q7Z3Z0 450 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC84Q86UT8 332 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SLC17A8Q8NDX2 589 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC26Q8TAB7 109 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 TACC3Q9Y6A5 838 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 F8W031 263 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SPOPO43791 374 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCNA1P78396 465 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 RASA3Q14644 834 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 DPY19L2Q6NUT2 758 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 RIMS2Q9UQ26 1411 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 F6X3S4 739 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 HDAC1Q13547 482 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 STMN2Q93045 179 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 NUF2Q9BZD4 464 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 NUCKS1Q9H1E3 243 aaKnown RBP4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC87Q9NVE4 849 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ARHGEF35A5YM69 484 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 NFKBIAP25963 317 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 MAP3K21Q5TCX8 1036 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 ZNF365Q70YC5 407 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 KRT222Q8N1A0 295 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA5Q8TBA6 731 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 TRPC6Q9Y210 931 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 CSADQ9Y600 493 aa4.55□□□□□ -1.68
SCN3A-201ENST00000283254 SOS2Q07890 1332 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ERICH4A6NGS2 130 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 IRS4O14654 1257 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ZBED4O75132 1171 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 HSPA1LP34931 641 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 PUM3Q15397 648 aaKnown RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 LMBR1LQ6UX01 489 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DTHD1Q6ZMT9 781 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DPH6Q7L8W6 267 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 CASQ2O14958 399 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 CALUO43852 315 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 SKILP12757 684 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 STMN1P16949 149 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 GABPAQ06546 454 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 PANK2Q9BZ23 570 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 NT5C3AQ9H0P0 336 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 CHPF2Q9P2E5 772 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 TSKSQ9UJT2 592 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 PIK3C2GO75747 1445 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ABCC10Q5T3U5 1492 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 KIF3CO14782 793 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 SLC12A2P55011 1212 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 UBXN1Q04323 297 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 HAUS1Q96CS2 278 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 YTHDC2Q9H6S0 1430 aaKnown RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 NESP48681 1621 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ESYT2A0FGR8 921 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DAPK3O43293 454 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 SYCE1Q8N0S2 351 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 HAUS8Q9BT25 410 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 MMRN2Q9H8L6 949 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DEXIO95424 95 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms