RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 NAA16Q6N069 864 aaPredicted RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 APOA5Q6Q788 366 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 SMARCC2Q8TAQ2 1214 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 PPP1R9BQ96SB3 815 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 UBAC1Q9BSL1 405 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 ZSCAN16Q9H4T2 348 aaPredicted RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 KCNJ14Q9UNX9 436 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 HPS5Q9UPZ3 1129 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 CLCN1P35523 988 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 IARSP41252 1262 aaKnown RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 TRIM29Q14134 588 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 TPTE2Q6XPS3 522 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 ARID3AQ99856 593 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 TCRBV5S4A2TA0A5A2 114 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 KIF28PB7ZC32 967 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 ZNF396Q96N95 335 aaPredicted RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 LLPHQ9BRT6 129 aaKnown RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 TRIM5Q9C035 493 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 BCL2L12Q9HB09 334 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 ABCA3Q99758 1704 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 FAM47AQ5JRC9 791 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 AKNAD1Q5T1N1 836 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 FAM84BQ96KN1 310 aaPredicted RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 ALDH8A1Q9H2A2 487 aaPredicted RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 GOLPH3LQ9H4A5 285 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 R3HCC1Q9Y3T6 440 aaKnown RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 TJP1Q07157 1748 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 ITGB4P16144 1822 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 BECN2A8MW95 431 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 USP17L21D6R901 530 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 LETM1O95202 739 aaPredicted RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 GUCY1A2P33402 732 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 ZNF165P49910 485 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 NFIXQ14938 502 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 WTAPQ15007 396 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 SART3Q15020 963 aaKnown RBP7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 TRAPPC3LQ5T215 181 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 NHSL1Q5SYE7 1610 aa7.04□□□□□ -1.28
TNFSF4-201ENST00000281834 SH2B2O14492 632 aaPredicted RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 NMT2O60551 498 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 TRIM37O94972 964 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 DIXDC1Q155Q3 683 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 VPS72Q15906 364 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 KRT40Q6A162 431 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 ILDR1Q86SU0 546 aaPredicted RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 DZIP1Q86YF9 867 aaKnown RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 SEPT12Q8IYM1 358 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 PCDHA7Q9UN72 937 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 UBR2Q8IWV8 1755 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 SLIT2O94813 1529 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 AP5Z1O43299 807 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CYP2D6P10635 497 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 HIBADHP31937 336 aaKnown RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 PPARAQ07869 468 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 DDX19AQ9NUU7 478 aaKnown RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 ZNF219Q9P2Y4 722 aaPredicted RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 F8W031 263 aaPredicted RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 HSPA1LP34931 641 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 HSP90AA4PQ58FG1 418 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 MYSM1Q5VVJ2 828 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CLEC4GQ6UXB4 293 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 PDILTQ8N807 584 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CNBD1Q8NA66 436 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CLIC6Q96NY7 704 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 AGXT2Q9BYV1 514 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CBX8Q9HC52 389 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 NARFQ9UHQ1 456 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 AFF2P51816 1311 aa7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 MYH14Q7Z406 1995 aaKnown RBP7.03□□□□□ -1.28
TNFSF4-201ENST00000281834 NUP188Q5SRE5 1749 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 COL14A1Q05707 1796 aaKnown RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 BTBD18B2RXH4 712 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 GOLGA6L19H0YKK7 550 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 SPTLC2O15270 562 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 RPS6KA4O75676 772 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 NDUFA8P51970 172 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 AKAP17AQ02040 695 aaKnown RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 SSRP1Q08945 709 aaKnown RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 KIAA2012Q0VF49 1180 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 RTN1Q16799 776 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 FAM200AQ8TCP9 573 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 CLSTN2Q9H4D0 955 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 LY9Q9HBG7 655 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 DOT1LQ8TEK3 1739 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 MECOMQ03112 1051 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 NR5A1Q13285 461 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms