RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PRIM1P49642 420 aaKnown RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 NECAB1Q8N987 351 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 STX8Q9UNK0 236 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 KSR2Q6VAB6 950 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 DHX32Q7L7V1 743 aaKnown RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 CHPF2Q9P2E5 772 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 SYCP2Q9BX26 1530 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 PEG3Q9GZU2 1588 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 RHOXF2BP0C7M4 288 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 WDR44Q5JSH3 913 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 MRPL50Q8N5N7 158 aaKnown RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 RPGRIP1Q96KN7 1286 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 RHOXF2Q9BQY4 288 aa8.94□□□□□ -0.98
LIMD1-201ENST00000273317 C14orf93Q9H972 538 aaKnown RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 SETD1BQ9UPS6 1966 aaKnown RBP8.94□□□□□ -0.98
LIMD1-201ENST00000273317 BUB1BO60566 1050 aaPredicted RBP8.93□□□□□ -0.98
LIMD1-201ENST00000273317 SARNPP82979 210 aaKnown RBP8.93□□□□□ -0.98
LIMD1-201ENST00000273317 FAM169AQ9Y6X4 670 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 IGHDP01880 384 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 CCT6BQ92526 530 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 CCDC65Q8IXS2 484 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 LZTFL1Q9NQ48 299 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 BCAP29Q9UHQ4 241 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 PPFIA1Q13136 1202 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 CREB3L3Q68CJ9 461 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 C8orf74Q6P047 294 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 SPATS2Q86XZ4 545 aaKnown RBP8.93□□□□□ -0.98
LIMD1-201ENST00000273317 TBC1D31Q96DN5 1066 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 ZNF830Q96NB3 372 aaPredicted RBP8.93□□□□□ -0.98
LIMD1-201ENST00000273317 TSHZ3Q63HK5 1081 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 DTHD1Q6ZMT9 781 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 HELLSQ9NRZ9 838 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 ARID5AQ03989 594 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 ANKRD2Q9GZV1 360 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 ZMYM3Q14202 1370 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 GOLGA6CA6NDK9 693 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 GOLGA6DP0CG33 693 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 GOLGA6AQ9NYA3 693 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 SMTNP53814 917 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 LZTS2Q9BRK4 669 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 CETN3O15182 167 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 NEDD9Q14511 834 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 IGSF22Q8N9C0 903 aa8.93□□□□□ -0.98
LIMD1-201ENST00000273317 FLT4P35916 1363 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 INPP5BP32019 993 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 NUF2Q9BZD4 464 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 EXOC7Q9UPT5 735 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 MYO5CQ9NQX4 1742 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 EXOC5O00471 708 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 EVCP57679 992 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 MAP3K21Q5TCX8 1036 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PPP2R5EQ16537 467 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 SV2BQ7L1I2 683 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 ZNF354CQ86Y25 554 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 RGS22Q8NE09 1264 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 SH2D4AQ9H788 454 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PLB1Q6P1J6 1458 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 INSRP06213 1382 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
LIMD1-201ENST00000273317 MYH10P35580 1976 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PARP1P09874 1014 aaKnown RBP8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PAK2Q13177 524 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 MCUR1Q96AQ8 359 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 STX10O60499 249 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 ERCC5P28715 1186 aaPredicted RBP8.92□□□□□ -0.98
LIMD1-201ENST00000273317 C8orf34Q49A92 452 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 CCDC117Q8IWD4 279 aaPredicted RBP8.92□□□□□ -0.98
LIMD1-201ENST00000273317 GJC1P36383 396 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PTPDC1A2A3K4 754 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 GOLGA6BA6NDN3 693 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 GPTP24298 496 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 VPS52Q8N1B4 723 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 CEP120Q8N960 986 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
LIMD1-201ENST00000273317 RAB11FIP4Q86YS3 637 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 MSH6P52701 1360 aa8.92□□□□□ -0.98
LIMD1-201ENST00000273317 PCK1P35558 622 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 KARSQ15046 597 aaKnown RBP8.91□□□□□ -0.98
LIMD1-201ENST00000273317 HAUS3Q68CZ6 603 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 CUTAO60888 179 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
LIMD1-201ENST00000273317 SLC8A3P57103 927 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 IRX4P78413 519 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 ITIH3Q06033 890 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 AK9Q5TCS8 1911 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 TNNI2P48788 182 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 RAB3IPQ96QF0 476 aaPredicted RBP8.91□□□□□ -0.98
LIMD1-201ENST00000273317 SSH2Q76I76 1423 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 VIMP08670 466 aaKnown RBP8.91□□□□□ -0.98
LIMD1-201ENST00000273317 TMTC1Q8IUR5 882 aa8.91□□□□□ -0.98
LIMD1-201ENST00000273317 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms