RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 GOLGA6AQ9NYA3 693 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 ARHGEF9O43307 516 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 ATAD2Q6PL18 1390 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 SPOPO43791 374 aa17.58■□□□□ 0.41
UBR3-201ENST00000272793 DAB2P98082 770 aa17.58■□□□□ 0.41
UBR3-201ENST00000272793 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.41
UBR3-201ENST00000272793 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.58■□□□□ 0.41
UBR3-201ENST00000272793 ARHGAP4P98171 946 aa17.58■□□□□ 0.41
UBR3-201ENST00000272793 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.4
UBR3-201ENST00000272793 GPRASP1Q5JY77 1395 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 CCDC85BQ15834 202 aaPredicted RBP17.58■□□□□ 0.4
UBR3-201ENST00000272793 SCINQ9Y6U3 715 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.4
UBR3-201ENST00000272793 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 CABP5Q9NP86 173 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 FAM186BQ8IYM0 893 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 AOPEPQ8N6M6 819 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.4
UBR3-201ENST00000272793 PDE4BQ07343 736 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 TRIM8Q9BZR9 551 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 EPS15L1Q9UBC2 864 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 HAND2P61296 217 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 HIF1AQ16665 826 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 PRKG1Q13976 671 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 CWF19L2Q2TBE0 894 aaKnown RBP17.57■□□□□ 0.4
UBR3-201ENST00000272793 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 KSR1Q8IVT5 923 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
UBR3-201ENST00000272793 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 SCOCQ9UIL1 159 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 KRT15P19012 456 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
UBR3-201ENST00000272793 NEUROG2Q9H2A3 272 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 RIPOR2Q9Y4F9 1068 aa17.57■□□□□ 0.4
UBR3-201ENST00000272793 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 MYH9P35579 1960 aaKnown RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 PPWD1Q96BP3 646 aaKnown RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 NRBF2Q96F24 287 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 PSMA7O14818 248 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 RPSAP08865 295 aaKnown RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 DENND2CQ68D51 928 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
UBR3-201ENST00000272793 CNPY2Q9Y2B0 182 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 KIF22Q14807 665 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 BSPRYQ5W0U4 402 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 HLA-DOAP06340 250 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 LMNB2Q03252 620 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 PPP2R5AQ15172 486 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
UBR3-201ENST00000272793 RLBP1P12271 317 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 HLA-DPA1P20036 260 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 U2AF2P26368 475 aaKnown RBP eCLIP17.55■□□□□ 0.48e-7■■■■■ 28.1
UBR3-201ENST00000272793 SYT10Q6XYQ8 523 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 STARD3NLO95772 234 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 ASIC1P78348 528 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 PCYT1AP49585 367 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 GLRX3O76003 335 aaKnown RBP17.55■□□□□ 0.4
UBR3-201ENST00000272793 SLC5A1P13866 664 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 ARHGAP25P42331 645 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 LGSNQ5TDP6 509 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 TBCCQ15814 346 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 EP400NLQ6ZTU2 488 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 NBNO60934 754 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 ESRRGP62508 458 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 BRD3Q15059 726 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 TMEM259Q4ZIN3 620 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 PIP4K2CQ8TBX8 421 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 TRIM31Q9BZY9 425 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 PLCB1Q9NQ66 1216 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 SLMAPQ14BN4 828 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 KRT82Q9NSB4 513 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
UBR3-201ENST00000272793 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 DRC3Q9H069 523 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 TTC4O95801 387 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 LRRD1A4D1F6 860 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 NUCB1Q02818 461 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 KRT80Q6KB66 452 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 UBL4BQ8N7F7 174 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 HDAC9Q9UKV0 1011 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 RIOK1Q9BRS2 568 aaKnown RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 CDV3Q9UKY7 258 aaKnown RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 HARSP12081 509 aaKnown RBP17.54■□□□□ 0.4
UBR3-201ENST00000272793 NLRP9Q7RTR0 991 aa17.54■□□□□ 0.4
UBR3-201ENST00000272793 PHLDB3Q6NSJ2 640 aa17.53■□□□□ 0.4
UBR3-201ENST00000272793 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms