RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
CD53-201ENST00000271324 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
CD53-201ENST00000271324 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
CD53-201ENST00000271324 PTPN22Q9Y2R2 807 aa8.06□□□□□ -1.12
CD53-201ENST00000271324 MYH13Q9UKX3 1938 aa8.06□□□□□ -1.12
CD53-201ENST00000271324 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
CD53-201ENST00000271324 XRCC6P12956 609 aaKnown RBP eCLIP8.05□□□□□ -1.12
CD53-201ENST00000271324 MMP14P50281 582 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 INHBEP58166 350 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 GRIK5Q16478 980 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 C15orf52Q6ZUT6 534 aaKnown RBP8.05□□□□□ -1.12
CD53-201ENST00000271324 MTERF4Q7Z6M4 381 aaKnown RBP8.05□□□□□ -1.12
CD53-201ENST00000271324 LINS1Q8NG48 757 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 TDRD3Q9H7E2 651 aaKnown RBP8.05□□□□□ -1.12
CD53-201ENST00000271324 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
CD53-201ENST00000271324 VAMP4O75379 141 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 MYCP01106 439 aaPredicted RBP8.04□□□□□ -1.12
CD53-201ENST00000271324 MCM4P33991 863 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 GYG1P46976 350 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 IFIT5Q13325 482 aaKnown RBP8.04□□□□□ -1.12
CD53-201ENST00000271324 SUPT20HL1Q3ZLR7 823 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 ZNF804AQ7Z570 1209 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 OPTNQ96CV9 577 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 SCUBE2Q9NQ36 999 aa8.04□□□□□ -1.12
CD53-201ENST00000271324 ZNF70Q9UC06 446 aaPredicted RBP8.04□□□□□ -1.12
CD53-201ENST00000271324 TESPA1A2RU30 521 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 TCP10L2B9ZVM9 353 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 MYO1BO43795 1136 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 ECM2O94769 699 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 TERF1P54274 439 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 CACNB3P54284 484 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 SP3Q02447 781 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 BEND3Q5T5X7 828 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 LDHAL6AQ6ZMR3 332 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 ANKRD13AQ8IZ07 590 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 BRI3BPQ8WY22 251 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 ERO1AQ96HE7 468 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 CHMP4AQ9BY43 222 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 PUS3Q9BZE2 481 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 GRPEL1Q9HAV7 217 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 PPP2R3BQ9Y5P8 575 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 TRIOBPQ9H2D6 2365 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 MGAMO43451 1857 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 ATN1P54259 1190 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 FKBP1AP62942 108 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 EXOSC9Q06265 439 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 VGLL4Q14135 290 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 CCDC27Q2M243 656 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 MFSD14BQ5SR56 506 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 SKAP1Q86WV1 359 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 FAM84BQ96KN1 310 aaPredicted RBP8.03□□□□□ -1.12
CD53-201ENST00000271324 ARHGAP39Q9C0H5 1083 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 CNNM1Q9NRU3 951 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 PTCH2Q9Y6C5 1203 aa8.03□□□□□ -1.12
CD53-201ENST00000271324 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 TRAK2O60296 914 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 FXR1P51114 621 aaKnown RBP eCLIP8.02□□□□□ -1.13
CD53-201ENST00000271324 CCDC173Q0VFZ6 552 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 CCDC57Q2TAC2 916 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 C20orf194Q5TEA3 1177 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 OTUD7BQ6GQQ9 843 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 DZIP1LQ8IYY4 767 aaKnown RBP8.02□□□□□ -1.13
CD53-201ENST00000271324 TDRD7Q8NHU6 1098 aaKnown RBP8.02□□□□□ -1.13
CD53-201ENST00000271324 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 KIF12Q96FN5 646 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 KAZALD1Q96I82 304 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 ZNF333Q96JL9 665 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 GBP4Q96PP9 640 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 COL6A3P12111 3177 aa8.02□□□□□ -1.13
CD53-201ENST00000271324 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 GRM8O00222 908 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
CD53-201ENST00000271324 MSNP26038 577 aaKnown RBP8.01□□□□□ -1.13
CD53-201ENST00000271324 TIE1P35590 1138 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 CRKP46108 304 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 PDE3AQ14432 1141 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 TAF1CQ15572 869 aaPredicted RBP8.01□□□□□ -1.13
CD53-201ENST00000271324 CCL15Q16663 113 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 TAF7LQ5H9L4 462 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 HSCBQ8IWL3 235 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.01□□□□□ -1.13
CD53-201ENST00000271324 SH3TC2Q8TF17 1288 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 ZKSCAN4Q969J2 545 aaPredicted RBP8.01□□□□□ -1.13
CD53-201ENST00000271324 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
CD53-201ENST00000271324 TSPYL2Q9H2G4 693 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms