RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 DCAF15Q66K64 600 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 CCDC102BQ68D86 513 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 OTOP1Q7RTM1 612 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 ERO1BQ86YB8 467 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 ZKSCAN4Q969J2 545 aaPredicted RBP21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 ERO1AQ96HE7 468 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 SNCAIPQ9Y6H5 919 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 RPAP1Q9BWH6 1393 aaPredicted RBP21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 BCAR3O75815 825 aa21.71■■□□□ 1.07
CSNK1D-201ENST00000269361 TRIM27P14373 513 aa21.71■■□□□ 1.07
CSNK1D-201ENST00000269361 MIGA2Q7L4E1 593 aa21.71■■□□□ 1.07
CSNK1D-201ENST00000269361 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-201ENST00000269361 SP3Q02447 781 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 TCP10Q12799 353 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 TFCP2Q12800 502 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 ATF7IPQ6VMQ6 1270 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 CD99L2Q8TCZ2 262 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 ZNF341Q9BYN7 854 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 USP40Q9NVE5 1235 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 AKAP2Q9Y2D5 859 aa21.7■■□□□ 1.06
CSNK1D-201ENST00000269361 NFIAQ12857 509 aa21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 FAM43AQ8N2R8 423 aa21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 ZGPATQ8N5A5 531 aaKnown RBP21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 ZFYVE28Q9HCC9 887 aa21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 TNNQ9UQP3 1299 aa21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 TNRC18O15417 2968 aaPredicted RBP21.69■■□□□ 1.06
CSNK1D-201ENST00000269361 A0A1B0GUL7 405 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 IRF6O14896 467 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 GNAI2P04899 355 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 CETPP11597 493 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 RASGRF1Q13972 1273 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 TAF1CQ15572 869 aaPredicted RBP21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 XAGE2Q96GT9 111 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 FAM198AQ9UFP1 575 aa21.68■■□□□ 1.06
CSNK1D-201ENST00000269361 OTOFQ9HC10 1997 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 PDS5AQ29RF7 1337 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 PPIL2Q13356 520 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 SNAPC2Q13487 334 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 CLUAP1Q96AJ1 413 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 EFCC1Q9HA90 598 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 ZNF112Q9UJU3 913 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 PTPN22Q9Y2R2 807 aa21.67■■□□□ 1.06
CSNK1D-201ENST00000269361 LAMB1P07942 1786 aa21.66■■□□□ 1.06
CSNK1D-201ENST00000269361 INPP5BP32019 993 aa21.66■■□□□ 1.06
CSNK1D-201ENST00000269361 PPATQ06203 517 aa21.66■■□□□ 1.06
CSNK1D-201ENST00000269361 MVPQ14764 893 aaKnown RBP21.66■■□□□ 1.06
CSNK1D-201ENST00000269361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-201ENST00000269361 GAKO14976 1311 aa21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 WDHD1O75717 1129 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 CAP1Q01518 475 aa21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 SPTY2D1Q68D10 685 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 DZIP1Q86YF9 867 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 ZFPM1Q8IX07 1006 aa21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 NEUROD6Q96NK8 337 aa21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 ABCF2Q9UG63 623 aa21.65■■□□□ 1.06
CSNK1D-201ENST00000269361 BTBD19C9JJ37 291 aa21.64■■□□□ 1.05
CSNK1D-201ENST00000269361 SLF2Q8IX21 1173 aa21.64■■□□□ 1.05
CSNK1D-201ENST00000269361 FAM163AQ96GL9 167 aaPredicted RBP21.64■■□□□ 1.05
CSNK1D-201ENST00000269361 IDI2Q9BXS1 227 aa21.64■■□□□ 1.05
CSNK1D-201ENST00000269361 ZCCHC17Q9NP64 241 aaKnown RBP21.64■■□□□ 1.05
CSNK1D-201ENST00000269361 PNMA6EA0A0J9YXQ4 647 aa21.63■■□□□ 1.05
CSNK1D-201ENST00000269361 ENTPD3O75355 529 aa21.63■■□□□ 1.05
CSNK1D-201ENST00000269361 ARHGEF6Q15052 776 aa21.63■■□□□ 1.05
CSNK1D-201ENST00000269361 ZKSCAN2Q63HK3 967 aa21.63■■□□□ 1.05
CSNK1D-201ENST00000269361 TLR2O60603 784 aa21.62■■□□□ 1.05
CSNK1D-201ENST00000269361 RGS3P49796 1198 aa21.62■■□□□ 1.05
CSNK1D-201ENST00000269361 G3BP1Q13283 466 aaKnown RBP eCLIP21.62■■□□□ 1.05
CSNK1D-201ENST00000269361 TMEM57Q8N5G2 664 aa21.62■■□□□ 1.05
CSNK1D-201ENST00000269361 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
CSNK1D-201ENST00000269361 HTTP42858 3142 aa21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 NOL9Q5SY16 702 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 MIER1Q8N108 512 aa21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 HMG20BQ9P0W2 317 aa21.61■■□□□ 1.05
CSNK1D-201ENST00000269361 BTDP43251 543 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 MECOMQ03112 1051 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 ARMC5Q96C12 935 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 KCNH4Q9UQ05 1017 aa21.6■■□□□ 1.05
CSNK1D-201ENST00000269361 SH3BP5LQ7L8J4 393 aa21.59■■□□□ 1.05
CSNK1D-201ENST00000269361 ANKRD23Q86SG2 305 aa21.59■■□□□ 1.05
CSNK1D-201ENST00000269361 ATRNL1Q5VV63 1379 aa21.59■■□□□ 1.05
CSNK1D-201ENST00000269361 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 GPR75-ASB3A0A0A6YYF3 556 aa21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 PHF20L1A8MW92 1017 aa21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 PI16Q6UXB8 463 aa21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 ZSCAN29Q8IWY8 852 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 ZNF384Q8TF68 577 aa21.58■■□□□ 1.05
CSNK1D-201ENST00000269361 RFX7Q2KHR2 1363 aa21.58■■□□□ 1.04
CSNK1D-201ENST00000269361 MYH13Q9UKX3 1938 aa21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 ARID4AP29374 1257 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 MAP3K10Q02779 954 aa21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 PICALMQ13492 652 aa21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 POLA2Q14181 598 aa21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 TBC1D9Q6ZT07 1266 aa21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 DDX4Q9NQI0 724 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-201ENST00000269361 POTEFA5A3E0 1075 aa21.56■■□□□ 1.04
CSNK1D-201ENST00000269361 DDTLA6NHG4 134 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms