RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 UBE2HP62256 183 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 RESTQ13127 1097 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 ZNF827Q17R98 1081 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 CSPP1Q1MSJ5 1256 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 STAG1Q8WVM7 1258 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 TMEM87BQ96K49 555 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
CCDC40-201ENST00000269318 FDPSP14324 419 aaKnown RBP19.53■□□□□ 0.72
CCDC40-201ENST00000269318 FAM173BQ6P4H8 233 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 C15orf52Q6ZUT6 534 aaKnown RBP19.53■□□□□ 0.72
CCDC40-201ENST00000269318 IGDCC4Q8TDY8 1250 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 CNNM2Q9H8M5 875 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 KIF3AQ9Y496 699 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 MAST2Q6P0Q8 1798 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-201ENST00000269318 HOXA10P31260 410 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-201ENST00000269318 KRT85P78386 507 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 MECOMQ03112 1051 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
CCDC40-201ENST00000269318 H3BQV1 296 aa19.52■□□□□ 0.72
CCDC40-201ENST00000269318 IFFO2Q5TF58 517 aa19.52■□□□□ 0.72
CCDC40-201ENST00000269318 RBM17Q96I25 401 aaKnown RBP19.52■□□□□ 0.72
CCDC40-201ENST00000269318 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
CCDC40-201ENST00000269318 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
CCDC40-201ENST00000269318 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.71
CCDC40-201ENST00000269318 DYNLL1P63167 89 aaKnown RBP19.52■□□□□ 0.71
CCDC40-201ENST00000269318 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.71
CCDC40-201ENST00000269318 MFSD6Q6ZSS7 791 aa19.52■□□□□ 0.71
CCDC40-201ENST00000269318 SGMS1Q86VZ5 419 aa19.52■□□□□ 0.71
CCDC40-201ENST00000269318 KRT23Q9C075 422 aa19.52■□□□□ 0.71
CCDC40-201ENST00000269318 ZSCAN16Q9H4T2 348 aaPredicted RBP19.52■□□□□ 0.71
CCDC40-201ENST00000269318 LY9Q9HBG7 655 aa19.52■□□□□ 0.71
CCDC40-201ENST00000269318 ELP1O95163 1332 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 KDM4AO75164 1064 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 PRDX5P30044 214 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 GPSM2P81274 684 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 PPARAQ07869 468 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
CCDC40-201ENST00000269318 TDRD7Q8NHU6 1098 aaKnown RBP19.51■□□□□ 0.71
CCDC40-201ENST00000269318 BRIP1Q9BX63 1249 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 SENP2Q9HC62 589 aa19.51■□□□□ 0.71
CCDC40-201ENST00000269318 APBA3O96018 575 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 LIFRP42702 1097 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 APOA5Q6Q788 366 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 SYAP1Q96A49 352 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-201ENST00000269318 BBOX1O75936 387 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 RAB11FIP4Q86YS3 637 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 CRAMP1Q96RY5 1269 aa19.5■□□□□ 0.71
CCDC40-201ENST00000269318 SYCE3A1L190 88 aa19.49■□□□□ 0.71
CCDC40-201ENST00000269318 PPFIA3O75145 1194 aa19.49■□□□□ 0.71
CCDC40-201ENST00000269318 GIMAP6Q6P9H5 292 aa19.49■□□□□ 0.71
CCDC40-201ENST00000269318 COL23A1Q86Y22 540 aaPredicted RBP19.49■□□□□ 0.71
CCDC40-201ENST00000269318 RNF41Q9H4P4 317 aaPredicted RBP19.49■□□□□ 0.71
CCDC40-201ENST00000269318 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
CCDC40-201ENST00000269318 NRXN2Q9P2S2 1712 aa19.49■□□□□ 0.71
CCDC40-201ENST00000269318 SOCS7O14512 581 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 IGSF3O75054 1194 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 TMEM67Q5HYA8 995 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 LRSAM1Q6UWE0 723 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 MTA3Q9BTC8 594 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 SCAND2PQ9GZW5 306 aaPredicted RBP19.48■□□□□ 0.71
CCDC40-201ENST00000269318 NLGN1Q8N2Q7 840 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 JAG2Q9Y219 1238 aa19.48■□□□□ 0.71
CCDC40-201ENST00000269318 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 LRRC37AA6NMS7 1700 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 RXRBP28702 533 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCDC40-201ENST00000269318 SPTY2D1Q68D10 685 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-201ENST00000269318 ZNF804AQ7Z570 1209 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 WDR66Q8TBY9 1149 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 GPR101Q96P66 508 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-201ENST00000269318 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
CCDC40-201ENST00000269318 MINDY4BA8MYZ0 360 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 CPLX1O14810 134 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 IFIT3O14879 490 aaKnown RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 FOSBP53539 338 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 TFIP11Q9UBB9 837 aaKnown RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 NID2Q14112 1375 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 TNS1Q9HBL0 1735 aaKnown RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 UFL1O94874 794 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 RRP12Q5JTH9 1297 aaKnown RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 LEO1Q8WVC0 666 aaPredicted RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 AATFQ9NY61 560 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 ORC3Q9UBD5 711 aaPredicted RBP19.46■□□□□ 0.71
CCDC40-201ENST00000269318 GGA1Q9UJY5 639 aa19.46■□□□□ 0.71
CCDC40-201ENST00000269318 DUOX1Q9NRD9 1551 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 ZBTB43O43298 467 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 FGRP09769 529 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 CDC27P30260 824 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 CCDC183Q5T5S1 534 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 FAM217BQ9NTX9 383 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms