RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 GOLGA6DP0CG33 693 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 NEDD9Q14511 834 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 C8orf74Q6P047 294 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 DDX12PQ92771 950 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 GOLGA6AQ9NYA3 693 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 BICDL2A1A5D9 508 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 E7EVH7 732 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 PDE4DQ08499 809 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 GSTO1P78417 241 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 TRMT44Q8IYL2 757 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 RNF113AO15541 343 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 TTC19Q6DKK2 380 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 NAPGQ99747 312 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
TSPAN3-201ENST00000267970 ST5P78524 1137 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 CEP85Q6P2H3 762 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 BACH1O14867 736 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 TBC1D8BQ0IIM8 1120 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 KIFC2Q96AC6 838 aa18.83■□□□□ 0.61
TSPAN3-201ENST00000267970 INF2Q27J81 1249 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 DYMQ7RTS9 669 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 PPFIBP2Q8ND30 876 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 INPP5BP32019 993 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 BLZF1Q9H2G9 400 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 TAB2Q9NYJ8 693 aa18.83■□□□□ 0.6
TSPAN3-201ENST00000267970 CCDC169A6NNP5 214 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 SNX21Q969T3 373 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 CBX8Q9HC52 389 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 MYL5Q02045 173 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 USP26Q9BXU7 913 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 DDX21Q9NR30 783 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 SNX16P57768 344 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
TSPAN3-201ENST00000267970 CHMLP26374 656 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 MTX1Q13505 466 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 GINS2Q9Y248 185 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TNFAIP3P21580 790 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 GUCY2FP51841 1108 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TMTC2Q8N394 836 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TTLL3Q9Y4R7 772 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 NOS1P29475 1434 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TRIM68Q6AZZ1 485 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 HS2ST1Q7LGA3 356 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 USP37Q86T82 979 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 ANKRD42Q8N9B4 389 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 HAUS7Q99871 368 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 FANCCQ00597 558 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 MYO1AQ9UBC5 1043 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 CLEC11AQ9Y240 323 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 SORBS3O60504 671 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TAB3Q8N5C8 712 aaPredicted RBP18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 LRRC45Q96CN5 670 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 ABCC5O15440 1437 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 TXKP42681 527 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 RNF34Q969K3 372 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 MTUS1Q9ULD2 1270 aa18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 UTP11Q9Y3A2 253 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-201ENST00000267970 PRDM1O75626 825 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 CAPN12Q6ZSI9 719 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 WHAMMQ8TF30 809 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 PHKBQ93100 1093 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 MBD4O95243 580 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 BMP15O95972 392 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 CCT6BQ92526 530 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 NELFCDQ8IXH7 590 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 DDX27Q96GQ7 796 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 TSGA10Q9BZW7 698 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 ARMT1Q9H993 441 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 CEP104O60308 925 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 TIMM10P62072 90 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 SV2BQ7L1I2 683 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 CCDC110Q8TBZ0 833 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 LRMPQ12912 555 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 SDCCAG8Q86SQ7 713 aaPredicted RBP18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 CCDC26Q8TAB7 109 aa18.8■□□□□ 0.6
TSPAN3-201ENST00000267970 ADKP55263 362 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 CERS3Q8IU89 383 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 ERO1AQ96HE7 468 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 SATB1Q01826 763 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 ASIC2Q16515 512 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 FRMD4BQ9Y2L6 1034 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 COBLO75128 1261 aa18.79■□□□□ 0.6
TSPAN3-201ENST00000267970 CTDSPL2Q05D32 466 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms