RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 SASH1O94885 1247 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 LIG1P18858 919 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 TXLNAP40222 546 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 HAND2P61296 217 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
CLSTN3-201ENST00000266546 SYKP43405 635 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 MTMR6Q9Y217 621 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 LRRC37A3O60309 1634 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 STRCP1A6NGW2 1772 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 CCDC102BQ68D86 513 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 HAUS7Q99871 368 aa13.21□□□□□ -0.3
CLSTN3-201ENST00000266546 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 ANKIB1Q9P2G1 1089 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 COL15A1P39059 1388 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 ADRA2BP18089 450 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 TDO2P48775 406 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 HSP90AA4PQ58FG1 418 aa13.2□□□□□ -0.3
CLSTN3-201ENST00000266546 MRC1P22897 1456 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 IVLP07476 585 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 CAPN2P17655 700 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 WASF1Q92558 559 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 RGL2O15211 777 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 HLFQ16534 295 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 KIAA1328Q86T90 577 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 PI4K2BQ8TCG2 481 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 EVCP57679 992 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
CLSTN3-201ENST00000266546 VGLL3A8MV65 326 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 MCM3P25205 808 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 FOXO4P98177 505 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 GOLGA1Q92805 767 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 NARFQ9UHQ1 456 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 ZNF213O14771 459 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 SPTLC2O15270 562 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 STIM1Q13586 685 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 ME3Q16798 604 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 GREM2Q9H772 168 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
CLSTN3-201ENST00000266546 LDHCP07864 332 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 NAPBQ9H115 298 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 SLC27A2O14975 620 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 PDE8BO95263 885 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 GNAT2P19087 354 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 RSPH14Q9UHP6 348 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 GOLGA6L10A6NI86 522 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 KCNQ2O43526 872 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 CYP2E1P05181 493 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 CEP89Q96ST8 783 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
CLSTN3-201ENST00000266546 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-201ENST00000266546 GTF2A1P52655 376 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-201ENST00000266546 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms