RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CUL4AQ13619 759 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 TEX11Q8IYF3 940 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 ZNF287Q9HBT7 754 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 INCENPQ9NQS7 918 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
SSR3-201ENST00000265044 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
SSR3-201ENST00000265044 NPR1P16066 1061 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 PPARAQ07869 468 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
SSR3-201ENST00000265044 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
SSR3-201ENST00000265044 CATIPQ7Z7H3 387 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 MAPKAPK5Q8IW41 473 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 ZNF512BQ96KM6 892 aaPredicted RBP10.89□□□□□ -0.67
SSR3-201ENST00000265044 TTC14Q96N46 770 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 SLC26A6Q9BXS9 759 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 CNPY2Q9Y2B0 182 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 TXNRD3Q86VQ6 643 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 MPHOSPH10O00566 681 aaKnown RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 PLSCR1O15162 318 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 PTMAP06454 111 aaKnown RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 POLD1P28340 1107 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 CRACR2BQ8N4Y2 399 aaPredicted RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 ITGB4P16144 1822 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 CYP2D7A0A087X1C5 515 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 ME1P48163 572 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 STK38Q15208 465 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 ZNF827Q17R98 1081 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 STOX1Q6ZVD7 989 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 GTF3C6Q969F1 213 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 ZNF396Q96N95 335 aaPredicted RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 DBNDD1Q9H9R9 158 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 SIPA1L3O60292 1781 aaPredicted RBP10.88□□□□□ -0.67
SSR3-201ENST00000265044 ARFGEF2Q9Y6D5 1785 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 ATRNO75882 1429 aa10.88□□□□□ -0.67
SSR3-201ENST00000265044 DDR1Q08345 913 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TICAM2Q86XR7 235 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 CD209Q9NNX6 404 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 CFAP45Q9UL16 551 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 COL22A1Q8NFW1 1626 aaPredicted RBP10.87□□□□□ -0.67
SSR3-201ENST00000265044 TSPY3P0CV98 308 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TSPY8P0CW00 308 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 SCNN1DP51172 638 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 SSRP1Q08945 709 aaKnown RBP10.87□□□□□ -0.67
SSR3-201ENST00000265044 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
SSR3-201ENST00000265044 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SSR3-201ENST00000265044 BRD1O95696 1058 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 CHRNA5P30532 468 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TOB2Q14106 344 aaPredicted RBP10.87□□□□□ -0.67
SSR3-201ENST00000265044 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 RTN1Q16799 776 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
SSR3-201ENST00000265044 PLCG2P16885 1265 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 SCRN1Q12765 414 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 CCDC73Q6ZRK6 1079 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 USP48Q86UV5 1035 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 KIAA0825Q8IV33 1275 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 RIC1Q4ADV7 1423 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 FAM47AQ5JRC9 791 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 OTUD7BQ6GQQ9 843 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 POLRMTO00411 1230 aaKnown RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 PPIP5K2O43314 1243 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 IKQ13123 557 aaPredicted RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 FBXO33Q7Z6M2 555 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 PROM2Q8N271 834 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 SCAND2PQ9GZW5 306 aaPredicted RBP10.86□□□□□ -0.67
SSR3-201ENST00000265044 KAT14Q9H8E8 782 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 BRMS1Q9HCU9 246 aa10.86□□□□□ -0.67
SSR3-201ENST00000265044 ADAMTS7Q9UKP4 1686 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 GSG1L2A8MUP6 293 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 RGL2O15211 777 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 BTDP43251 543 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 OLFM4Q6UX06 510 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 CDC37L1Q7L3B6 337 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 TBC1D10CQ8IV04 446 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 WASF1Q92558 559 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 ZSWIM5Q9P217 1185 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 SYCE3A1L190 88 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 LARGE2Q8N3Y3 721 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 TBC1D16Q8TBP0 767 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 PHKBQ93100 1093 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 CRAMP1Q96RY5 1269 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms