RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 SLF2Q8IX21 1173 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 AATFQ9NY61 560 aaKnown RBP eCLIP28.33■■■□□ 2.13
EPCAM-201ENST00000263735 MROH7-TTC4A0A0A0MT08 1334 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 MYH1P12882 1939 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 TDO2P48775 406 aa28.32■■■□□ 2.12
EPCAM-201ENST00000263735 CERS3Q8IU89 383 aa28.32■■■□□ 2.12
EPCAM-201ENST00000263735 LIMCH1Q9UPQ0 1083 aa28.32■■■□□ 2.12
EPCAM-201ENST00000263735 GIMAP6Q6P9H5 292 aa28.32■■■□□ 2.12
EPCAM-201ENST00000263735 CRNKL1Q9BZJ0 848 aaKnown RBP28.32■■■□□ 2.12
EPCAM-201ENST00000263735 DBNDD1Q9H9R9 158 aa28.32■■■□□ 2.12
EPCAM-201ENST00000263735 ADAMTSL1Q8N6G6 1762 aa28.31■■■□□ 2.12
EPCAM-201ENST00000263735 ECE2O60344 883 aa28.31■■■□□ 2.12
EPCAM-201ENST00000263735 NOL8Q76FK4 1167 aaKnown RBP28.31■■■□□ 2.12
EPCAM-201ENST00000263735 NOL10Q9BSC4 688 aaKnown RBP28.31■■■□□ 2.12
EPCAM-201ENST00000263735 DDX60LQ5H9U9 1706 aaKnown RBP28.3■■■□□ 2.12
EPCAM-201ENST00000263735 CUL4AQ13619 759 aa28.3■■■□□ 2.12
EPCAM-201ENST00000263735 COL9A3Q14050 684 aaPredicted RBP28.3■■■□□ 2.12
EPCAM-201ENST00000263735 AOC3Q16853 763 aa28.3■■■□□ 2.12
EPCAM-201ENST00000263735 DHX32Q7L7V1 743 aaKnown RBP28.3■■■□□ 2.12
EPCAM-201ENST00000263735 SDR42E1Q8WUS8 393 aa28.3■■■□□ 2.12
EPCAM-201ENST00000263735 BAG3O95817 575 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 FKBP1AP62942 108 aaKnown RBP28.29■■■□□ 2.12
EPCAM-201ENST00000263735 DIXDC1Q155Q3 683 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 FBXW7Q969H0 707 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 FAM163AQ96GL9 167 aaPredicted RBP28.29■■■□□ 2.12
EPCAM-201ENST00000263735 NBPF3Q9H094 633 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 PPP4CP60510 307 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 DALRD3Q5D0E6 543 aaKnown RBP28.29■■■□□ 2.12
EPCAM-201ENST00000263735 NCOA7Q8NI08 942 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 ZSCAN31Q96LW9 406 aaPredicted RBP28.29■■■□□ 2.12
EPCAM-201ENST00000263735 VPS33BQ9H267 617 aa28.29■■■□□ 2.12
EPCAM-201ENST00000263735 PPIP5K2O43314 1243 aa28.28■■■□□ 2.12
EPCAM-201ENST00000263735 ATP8A2Q9NTI2 1148 aa28.28■■■□□ 2.12
EPCAM-201ENST00000263735 PPP1R1BQ9UD71 204 aaPredicted RBP28.28■■■□□ 2.12
EPCAM-201ENST00000263735 GAKO14976 1311 aa28.27■■■□□ 2.12
EPCAM-201ENST00000263735 DDIT3P35638 169 aa28.27■■■□□ 2.12
EPCAM-201ENST00000263735 STRIP1Q5VSL9 837 aa28.27■■■□□ 2.12
EPCAM-201ENST00000263735 EXOSC10Q01780 885 aaKnown RBP28.26■■■□□ 2.12
EPCAM-201ENST00000263735 TRDNQ13061 729 aa28.26■■■□□ 2.12
EPCAM-201ENST00000263735 TOB2Q14106 344 aaPredicted RBP28.26■■■□□ 2.12
EPCAM-201ENST00000263735 RALYLQ86SE5 291 aaKnown RBP28.26■■■□□ 2.12
EPCAM-201ENST00000263735 TBC1D10CQ8IV04 446 aa28.26■■■□□ 2.12
EPCAM-201ENST00000263735 CERS5Q8N5B7 392 aa28.26■■■□□ 2.12
EPCAM-201ENST00000263735 INTS4Q96HW7 963 aaKnown RBP28.26■■■□□ 2.12
EPCAM-201ENST00000263735 TCEANC2Q96MN5 208 aa28.26■■■□□ 2.12
EPCAM-201ENST00000263735 SH2B1Q9NRF2 756 aaPredicted RBP28.26■■■□□ 2.12
EPCAM-201ENST00000263735 WDR19Q8NEZ3 1342 aa28.25■■■□□ 2.11
EPCAM-201ENST00000263735 GPR75-ASB3A0A0A6YYF3 556 aa28.25■■■□□ 2.11
EPCAM-201ENST00000263735 MB21D2Q8IYB1 491 aaPredicted RBP28.25■■■□□ 2.11
EPCAM-201ENST00000263735 PLCG2P16885 1265 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 Q6ZUG5 572 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 KLHL34Q8N239 644 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 AGXT2Q9BYV1 514 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 FOXD4L1Q9NU39 408 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 ANAPC4Q9UJX5 808 aa28.24■■■□□ 2.11
EPCAM-201ENST00000263735 CIZ1Q9ULV3 898 aaPredicted RBP28.24■■■□□ 2.11
EPCAM-201ENST00000263735 USP17L3A6NCW0 530 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 USP17L4A6NCW7 530 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 MCM5P33992 734 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 PPARAQ07869 468 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 USP17L1Q7RTZ2 530 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 FBXL16Q8N461 479 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 CWC22Q9HCG8 908 aaKnown RBP28.23■■■□□ 2.11
EPCAM-201ENST00000263735 DCP1AQ9NPI6 582 aaPredicted RBP28.23■■■□□ 2.11
EPCAM-201ENST00000263735 CHMP5Q9NZZ3 219 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 BTDP43251 543 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 DACT2Q5SW24 774 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 AKNAD1Q5T1N1 836 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 STAG1Q8WVM7 1258 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 CNNM2Q9H8M5 875 aa28.23■■■□□ 2.11
EPCAM-201ENST00000263735 MYH8P13535 1937 aa28.22■■■□□ 2.11
EPCAM-201ENST00000263735 SPON1Q9HCB6 807 aa28.22■■■□□ 2.11
EPCAM-201ENST00000263735 ARPP21Q9UBL0 812 aaPredicted RBP28.22■■■□□ 2.11
EPCAM-201ENST00000263735 TPCN1Q9ULQ1 816 aa28.22■■■□□ 2.11
EPCAM-201ENST00000263735 TTF2Q9UNY4 1162 aaKnown RBP28.22■■■□□ 2.11
EPCAM-201ENST00000263735 COL4A5P29400 1685 aa28.22■■■□□ 2.11
EPCAM-201ENST00000263735 CTDSPL2Q05D32 466 aa28.21■■■□□ 2.11
EPCAM-201ENST00000263735 SH3RF3Q8TEJ3 882 aaPredicted RBP28.21■■■□□ 2.11
EPCAM-201ENST00000263735 LARP6Q9BRS8 491 aaKnown RBP28.21■■■□□ 2.11
EPCAM-201ENST00000263735 RNF41Q9H4P4 317 aaPredicted RBP28.21■■■□□ 2.11
EPCAM-201ENST00000263735 KCNQ5Q9NR82 932 aa28.21■■■□□ 2.11
EPCAM-201ENST00000263735 FGD1P98174 961 aa28.21■■■□□ 2.11
EPCAM-201ENST00000263735 MFSD6Q6ZSS7 791 aa28.21■■■□□ 2.11
EPCAM-201ENST00000263735 KRT23Q9C075 422 aa28.21■■■□□ 2.11
EPCAM-201ENST00000263735 NEDD4P46934 1319 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 USP5P45974 858 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 SBK1Q52WX2 424 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 CTR9Q6PD62 1173 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 MXD3Q9BW11 206 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 DAGLAQ9Y4D2 1042 aa28.2■■■□□ 2.1
EPCAM-201ENST00000263735 MINDY4BA8MYZ0 360 aa28.19■■■□□ 2.1
EPCAM-201ENST00000263735 LARGE1O95461 756 aa28.19■■■□□ 2.1
EPCAM-201ENST00000263735 ME3Q16798 604 aa28.19■■■□□ 2.1
EPCAM-201ENST00000263735 HHIPL2Q6UWX4 724 aa28.19■■■□□ 2.1
EPCAM-201ENST00000263735 LARGE2Q8N3Y3 721 aa28.19■■■□□ 2.1
EPCAM-201ENST00000263735 ZNF277Q9NRM2 450 aaPredicted RBP28.19■■■□□ 2.1
EPCAM-201ENST00000263735 YDJCA8MPS7 323 aa28.18■■■□□ 2.1
EPCAM-201ENST00000263735 PRC1O43663 620 aa28.18■■■□□ 2.1
EPCAM-201ENST00000263735 PCP11498 1178 aaKnown RBP28.18■■■□□ 2.1
EPCAM-201ENST00000263735 BRF1Q92994 677 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms