RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 AFAP1L1Q8TED9 768 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 FAM184BQ9ULE4 1060 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 GBP1P32455 592 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 PLCD1P51178 756 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 DCAF17Q5H9S7 520 aaPredicted RBP19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 CACNA2D3Q8IZS8 1091 aa19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 FEZ2Q9UHY8 353 aaPredicted RBP19.58■□□□□ 0.72
NOTCH3-201ENST00000263388 GJC1P36383 396 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 ERO1AQ96HE7 468 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 CEP85Q6P2H3 762 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 APOBRQ0VD83 1088 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 IFT20Q8IY31 132 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 SMIM23A6NLE4 172 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 MCM9Q9NXL9 1143 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 STK24Q9Y6E0 443 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 FAM169AQ9Y6X4 670 aa19.57■□□□□ 0.72
NOTCH3-201ENST00000263388 CCT6AP40227 531 aaKnown RBP19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 FYB2Q5VWT5 728 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 NAPGQ99747 312 aaPredicted RBP19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 HELLSQ9NRZ9 838 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 FLT4P35916 1363 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 WDR7Q9Y4E6 1490 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 RILPL1Q5EBL4 403 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 EPSTI1Q96J88 318 aa19.56■□□□□ 0.72
NOTCH3-201ENST00000263388 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 EVCP57679 992 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 PLS1Q14651 629 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 TAOK1Q7L7X3 1001 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 NUP58Q9BVL2 599 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 RASSF4Q9H2L5 321 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 SYNRGQ9UMZ2 1314 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 PPFIBP2Q8ND30 876 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 CTNND2Q9UQB3 1225 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 VWA3AA6NCI4 1184 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 GABPB2Q8TAK5 448 aaPredicted RBP19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 SMTNP53814 917 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 PICALMQ13492 652 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
NOTCH3-201ENST00000263388 WDR44Q5JSH3 913 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 CROCCP2Q86T23 111 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 TRPM2O94759 1503 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 NAA25Q14CX7 972 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 TBC1D31Q96DN5 1066 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 STX17P56962 302 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 CASQ2O14958 399 aaPredicted RBP19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 ANXA1P04083 346 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 PAXIP1Q6ZW49 1069 aaPredicted RBP19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 DPH6Q7L8W6 267 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 IGSF22Q8N9C0 903 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 FAM212AQ96EL1 285 aa19.54■□□□□ 0.72
NOTCH3-201ENST00000263388 CHMLP26374 656 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 GLT8D2Q9H1C3 349 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 NOC4LQ9BVI4 516 aaKnown RBP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 USP26Q9BXU7 913 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 STX10O60499 249 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 TNNI2P48788 182 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 C8orf74Q6P047 294 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 CERS3Q8IU89 383 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 UHRF1BP1LA0JNW5 1464 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 VIMP08670 466 aaKnown RBP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 RAPGEF1Q13905 1077 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 GBP7Q8N8V2 638 aaPredicted RBP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 C8orf58Q8NAV2 365 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 VCXQ9H320 206 aa19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 CALUO43852 315 aaPredicted RBP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 LDHBP07195 334 aaKnown RBP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 NIP7Q9Y221 180 aaKnown RBP eCLIP19.53■□□□□ 0.72
NOTCH3-201ENST00000263388 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 ERCC5P28715 1186 aaPredicted RBP19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 CNGA1P29973 690 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 KRBA2Q6ZNG9 492 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 LMNTD2Q8IXW0 634 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 VPS52Q8N1B4 723 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 ANKRD2Q9GZV1 360 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 TLDC2A0PJX2 215 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 KRT5P13647 590 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 RPS6KB1P23443 525 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 A0A1B0GVL5 298 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 FAM114A2Q9NRY5 505 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 GOLGA6CA6NDK9 693 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 GOLGA6DP0CG33 693 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 SLC8A3P57103 927 aa19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 BICC1Q9H694 974 aaKnown RBP19.52■□□□□ 0.72
NOTCH3-201ENST00000263388 GOLGA6AQ9NYA3 693 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms