RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 DHX32Q7L7V1 743 aaKnown RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 NSUN7Q8NE18 718 aaKnown RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 ATP1A3P13637 1013 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 ERCC3P19447 782 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 RBM5P52756 815 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 EVCP57679 992 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 PTPN12Q05209 780 aaKnown RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 CC2D1AQ6P1N0 951 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
SCARF1-201ENST00000263071 GPTP24298 496 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 PHKBQ93100 1093 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 DENND2AQ9ULE3 1009 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 FBXW10Q5XX13 1052 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 TTLL7Q6ZT98 887 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 CPLX3Q8WVH0 158 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
SCARF1-201ENST00000263071 E7EWF7 191 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
SCARF1-201ENST00000263071 C11orf91Q3C1V1 193 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 CARD6Q9BX69 1037 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 ACBD3Q9H3P7 528 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 L2HGDHQ9H9P8 463 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 HMG20BQ9P0W2 317 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 TTC39AQ5SRH9 613 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 PLA2G4DQ86XP0 818 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 TDRD7Q8NHU6 1098 aaKnown RBP16.17■□□□□ 0.18
SCARF1-201ENST00000263071 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
SCARF1-201ENST00000263071 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
SCARF1-201ENST00000263071 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
SCARF1-201ENST00000263071 MRPS27Q92552 414 aaKnown RBP16.17■□□□□ 0.18
SCARF1-201ENST00000263071 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 TEX11Q8IYF3 940 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 TATP17735 454 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-201ENST00000263071 TACO1Q9BSH4 297 aaKnown RBP16.16■□□□□ 0.18
SCARF1-201ENST00000263071 COL15A1P39059 1388 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 PHACTR2O75167 634 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
SCARF1-201ENST00000263071 CTDNEP1O95476 244 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 CCDC102AQ96A19 550 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 UBXN6Q9BZV1 441 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
SCARF1-201ENST00000263071 UBE2Q2LH0YL09 131 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 HSPD1P10809 573 aaKnown RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 ADORA1P30542 326 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 FAM160A1Q05DH4 1040 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 METTL22Q9BUU2 404 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 COBLO75128 1261 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 ZNF827Q17R98 1081 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 CPLX2Q6PUV4 134 aaKnown RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 FAXDC2Q96IV6 333 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 H3BQF6 201 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 CTAGE5O15320 804 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 PDE11AQ9HCR9 933 aa16.15■□□□□ 0.18
SCARF1-201ENST00000263071 SPATS2LQ9NUQ6 558 aaKnown RBP16.15■□□□□ 0.18
SCARF1-201ENST00000263071 PRC1O43663 620 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.17
SCARF1-201ENST00000263071 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 CEP126Q9P2H0 1117 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 ATP5JP18859 108 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 IQCB1Q15051 598 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
SCARF1-201ENST00000263071 SPTLC2O15270 562 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 MTX1Q13505 466 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 KBTBD3Q8NAB2 608 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 FAM210AQ96ND0 272 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 ETAA1Q9NY74 926 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 ZNF609O15014 1411 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 EFCAB8A8MWE9 144 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 M0R2C6 588 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 PDIA6Q15084 440 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
SCARF1-201ENST00000263071 KAT2BQ92831 832 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 BORCS6Q96GS4 357 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 FAN1Q9Y2M0 1017 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 GCKP35557 465 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 PNOCQ13519 176 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
SCARF1-201ENST00000263071 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
SCARF1-201ENST00000263071 PROSER2Q86WR7 435 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms