RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 LDHAL6AQ6ZMR3 332 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 AACSQ86V21 672 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 CD248Q9HCU0 757 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 ZSCAN12O43309 604 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 GRM1Q13255 1194 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 LRRFIP1Q32MZ4 808 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 MAP9Q49MG5 647 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 SWT1Q5T5J6 900 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 CC2D1AQ6P1N0 951 aaPredicted RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 GDAP1L1Q96MZ0 367 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 USP26Q9BXU7 913 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 YIPF3Q9GZM5 350 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 CTAGE5O15320 804 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 PPP1R12BO60237 982 aaPredicted RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 GCFC2P16383 781 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 CPLX2Q6PUV4 134 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 KIF2CQ99661 725 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 BOLA2Q9H3K6 86 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 JCADQ9P266 1359 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 KIF20BQ96Q89 1820 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
LDB3-201ENST00000263066 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
LDB3-201ENST00000263066 TPD52L2O43399 206 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 ATP8B1O43520 1251 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 ATRIPQ8WXE1 791 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 PARD6BQ9BYG5 372 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 HYPKQ9NX55 129 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 ADAMTSL3P82987 1691 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 EFCAB8A8MWE9 144 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 IDH1O75874 414 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 CCDC70Q6NSX1 233 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 PPP1R42Q7Z4L9 355 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 TBC1D31Q96DN5 1066 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 GPATCH3Q96I76 525 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 STK32BQ9NY57 414 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 PEAK1Q9H792 1746 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 CPS1P31327 1500 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 EIF4A1P60842 406 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 IFIT5Q13325 482 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 ARL10Q8N8L6 244 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 CAGE1Q8TC20 777 aa9.52□□□□□ -0.89
LDB3-201ENST00000263066 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
LDB3-201ENST00000263066 H2AFXP16104 143 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 HSPA4P34932 840 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 ETF1P62495 437 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 TRAF1Q13077 416 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 CCDC144BQ3MJ40 725 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 CCDC144CPQ8IYA2 1237 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 TNS3Q68CZ2 1445 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 BUB1BO60566 1050 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 NBPF7P0C2Y1 421 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 RMI1Q9H9A7 625 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 IGSF1Q8N6C5 1336 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 SYT1P21579 422 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 IGHMBP2P38935 993 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 FAM173BQ6P4H8 233 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 C16orf71Q8IYS4 520 aaPredicted RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 ACRBPQ8NEB7 543 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 TBC1D22AQ8WUA7 517 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 ITFG2Q969R8 447 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 FSD1Q9BTV5 496 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 BAIAP2L1Q9UHR4 511 aa9.51□□□□□ -0.89
LDB3-201ENST00000263066 XIRP1Q702N8 1843 aaKnown RBP9.51□□□□□ -0.89
LDB3-201ENST00000263066 SOS2Q07890 1332 aaPredicted RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 CHL1O00533 1208 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 AP5Z1O43299 807 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 APOBRQ0VD83 1088 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 AOPEPQ8N6M6 819 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 LRRN4CLQ8ND94 238 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 XRN1Q8IZH2 1706 aaKnown RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 R3HDM1Q15032 1099 aaKnown RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 DDX19AQ9NUU7 478 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms