RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 IGF2-ASQ6U949 168 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 MPRIPQ6WCQ1 1025 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 FBXO11Q86XK2 927 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 TMEM87AQ8NBN3 555 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 UBASH3BQ8TF42 649 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 TTC9Q92623 222 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 TGIF2Q9GZN2 237 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 ADAM19Q9H013 955 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 C12orf49Q9H741 205 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 ADGRE2Q9UHX3 823 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 SPG7Q9UQ90 795 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 H3BRJ5 948 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 CELA3AP09093 270 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 SPINK2P20155 84 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 ITPKAP23677 461 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 GSTM4Q03013 218 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 PCDH1Q08174 1060 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 RASIP1Q5U651 963 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 PRPF40BQ6NWY9 871 aaKnown RBP3.45□□□□□ -1.86
ATF1-201ENST00000262053 NT5DC4Q86YG4 428 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 STK35Q8TDR2 534 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 RNF34Q969K3 372 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 SRCIN1Q9C0H9 1055 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 CLEC4MQ9H2X3 399 aaPredicted RBP3.45□□□□□ -1.86
ATF1-201ENST00000262053 VTI1BQ9UEU0 232 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 GPN3Q9UHW5 284 aaPredicted RBP3.45□□□□□ -1.86
ATF1-201ENST00000262053 ENC1O14682 589 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 ZNF76P36508 570 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 IREB2P48200 963 aaKnown RBP3.44□□□□□ -1.86
ATF1-201ENST00000262053 PTPN12Q05209 780 aaKnown RBP3.44□□□□□ -1.86
ATF1-201ENST00000262053 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 DTX1Q86Y01 620 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 SLC43A3Q8NBI5 491 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 USP26Q9BXU7 913 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 SEC31BQ9NQW1 1179 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 DBX1A6NMT0 343 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 EIF4BP23588 611 aaKnown RBP3.44□□□□□ -1.86
ATF1-201ENST00000262053 NOS3P29474 1203 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 CABP4P57796 275 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 MAP3K11Q16584 847 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 UBXN4Q92575 508 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 TINF2Q9BSI4 451 aa3.44□□□□□ -1.86
ATF1-201ENST00000262053 TTF2Q9UNY4 1162 aaKnown RBP3.44□□□□□ -1.86
ATF1-201ENST00000262053 USP31Q70CQ4 1352 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 FAM177BA6PVY3 158 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 DLL1O00548 723 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 B3GALT4O96024 378 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 GSTT1P30711 240 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 CD68P34810 354 aaPredicted RBP3.43□□□□□ -1.86
ATF1-201ENST00000262053 ST13P50502 369 aaKnown RBP3.43□□□□□ -1.86
ATF1-201ENST00000262053 DZIP1LQ8IYY4 767 aaKnown RBP3.43□□□□□ -1.86
ATF1-201ENST00000262053 WDR89Q96FK6 387 aaPredicted RBP3.43□□□□□ -1.86
ATF1-201ENST00000262053 GMLQ99445 158 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 NRSN2Q9GZP1 204 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 FAM8A1Q9UBU6 413 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 TRAK1Q9UPV9 953 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 RAXQ9Y2V3 346 aa3.43□□□□□ -1.86
ATF1-201ENST00000262053 C19orf57Q0VDD7 668 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 C9orf131Q5VYM1 1079 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 GRIN3AQ8TCU5 1115 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 ANKRD24Q8TF21 1146 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 ARMC5Q96C12 935 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 TLR6Q9Y2C9 796 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 LOC100289279A0A1B0GTE1 492 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 DRD2P14416 443 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 MAOBP27338 520 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 PIP4K2BP78356 416 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 CCDC85BQ15834 202 aaPredicted RBP3.42□□□□□ -1.86
ATF1-201ENST00000262053 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 ACAD11Q709F0 780 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 AKTIPQ9H8T0 292 aa3.42□□□□□ -1.86
ATF1-201ENST00000262053 PKN1Q16512 942 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 DUOXA2Q1HG44 320 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 MAP1SQ66K74 1059 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 FAM117BQ6P1L5 589 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 KIAA1211Q6ZU35 1233 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 LSRQ86X29 649 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 MEGF10Q96KG7 1140 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 NECAB3Q96P71 396 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 SRA1Q9HD15 236 aaKnown RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 DDX41Q9UJV9 622 aaKnown RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 PTPN11Q06124 597 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 TAF1CQ15572 869 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 TMEM130Q8N3G9 435 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 MRPL18Q9H0U6 180 aaKnown RBP3.41□□□□□ -1.86
ATF1-201ENST00000262053 CCSER2Q9H7U1 834 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 CBX8Q9HC52 389 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 COPRSQ9NQ92 184 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 TMEM39AQ9NV64 488 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 PPP4R2Q9NY27 417 aa3.41□□□□□ -1.86
ATF1-201ENST00000262053 LIG1P18858 919 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 CDK8P49336 464 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 PCNX4Q63HM2 1172 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 HS2ST1Q7LGA3 356 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 SULF2Q8IWU5 870 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 KLHL23Q8NBE8 558 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 KCNB2Q92953 911 aa3.4□□□□□ -1.87
ATF1-201ENST00000262053 CCDC86Q9H6F5 360 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms